ID C5CR23_VARPS Unreviewed; 314 AA.
AC C5CR23;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 84.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS19868.1};
GN OrderedLocusNames=Vapar_3250 {ECO:0000313|EMBL:ACS19868.1};
OS Variovorax paradoxus (strain S110).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS19868.1};
RN [1] {ECO:0000313|EMBL:ACS19868.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S110 {ECO:0000313|EMBL:ACS19868.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA Leadbetter J.R., Spain J.C., Han J.I.;
RT "Complete sequence of chromosome 1 of Variovorax paradoxus S110.";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP001635; ACS19868.1; -; Genomic_DNA.
DR AlphaFoldDB; C5CR23; -.
DR STRING; 543728.Vapar_3250; -.
DR KEGG; vap:Vapar_3250; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_37_1_4; -.
DR OMA; LQHEHYT; -.
DR OrthoDB; 8591238at2; -.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08432; PBP2_GcdR_TrpI_HvrB_AmpR_like; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537:SF26; GLYCINE CLEAVAGE SYSTEM TRANSCRIPTIONAL ACTIVATOR; 1.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 6..63
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
FT REGION 292..314
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 314 AA; 34152 MW; 06A90DF1FFA45D9B CRC64;
MEHQLPPLNA LRAFEATARH LSVKNAADEL CVTAGAVSQL IKSLELHLGI ALFRRANRGI
FLTDAGQAYL PPVRNAFRQI SDATRRIAMP AETGILTVST TPFFASAWLV PRLKSFHDAH
PDIDLQVVSS TALADFSRDG VDVAIRHGLG RYPGLISQRV LTVEIVPVAT PALVRQLGMP
ASPADLTRWP RVNDAERKGW AMWFEAQGIE DARPARGPSF DDSGLLLKAV LAGQGAGLLP
AALVADEVAE GRLVQLSEAA WLEDFAYYLV HPEDSRHRPK VAAFREWIAA ESSRKAARPP
RKTPVKAARS RAGS
//