ID C5CRD0_VARPS Unreviewed; 309 AA.
AC C5CRD0;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 87.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS21806.1};
DE Flags: Precursor;
GN OrderedLocusNames=Vapar_5204 {ECO:0000313|EMBL:ACS21806.1};
OS Variovorax paradoxus (strain S110).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS21806.1};
RN [1] {ECO:0000313|EMBL:ACS21806.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S110 {ECO:0000313|EMBL:ACS21806.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA Leadbetter J.R., Spain J.C., Han J.I.;
RT "Complete sequence of chromosome 1 of Variovorax paradoxus S110.";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP001635; ACS21806.1; -; Genomic_DNA.
DR AlphaFoldDB; C5CRD0; -.
DR STRING; 543728.Vapar_5204; -.
DR KEGG; vap:Vapar_5204; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_37_1_4; -.
DR OrthoDB; 9178397at2; -.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537:SF26; GLYCINE CLEAVAGE SYSTEM TRANSCRIPTIONAL ACTIVATOR; 1.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
FT DOMAIN 8..65
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 309 AA; 34105 MW; 91AE4F58950FB833 CRC64;
MSLRRLNPPL NLLRAFSTVV RFGGVSRAAE ALHLTQGAVS KQVQELERWI GVPLFERSRK
RLALTPAGER YEKAVRALLA QLEAATLEFI TSGDGGGALH LSTLPTFGAK WLIPRLPDFQ
RLHPQITLHF VPFVHGYDFE RPELDCAILF GDGHWPGARS HYLAGRDVAL IAPRAGLAEA
AIRTPQDVAR CTLLRHVTVP QSWLQWSEAH GVRGLDPLAG PQFDQFQTMI RAVMVGMGVA
LVPRCLVQDE IASGLVDEPL PGGGYRGDQG YWFCYPEGRG QLATLDHFRR WLLADADRSA
EEQAPPALA
//
