ID C5CT99_VARPS Unreviewed; 594 AA.
AC C5CT99;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE SubName: Full=TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ACS18224.1};
DE Flags: Precursor;
GN OrderedLocusNames=Vapar_1573 {ECO:0000313|EMBL:ACS18224.1};
OS Variovorax paradoxus (strain S110).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS18224.1};
RN [1] {ECO:0000313|EMBL:ACS18224.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S110 {ECO:0000313|EMBL:ACS18224.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA Leadbetter J.R., Spain J.C., Han J.I.;
RT "Complete sequence of chromosome 1 of Variovorax paradoxus S110.";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Part of the tripartite ATP-independent periplasmic (TRAP)
CC transport system. {ECO:0000256|RuleBase:RU369079}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane
CC {ECO:0000256|ARBA:ARBA00004429, ECO:0000256|RuleBase:RU369079}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004429,
CC ECO:0000256|RuleBase:RU369079}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; CP001635; ACS18224.1; -; Genomic_DNA.
DR AlphaFoldDB; C5CT99; -.
DR STRING; 543728.Vapar_1573; -.
DR KEGG; vap:Vapar_1573; -.
DR eggNOG; COG4664; Bacteria.
DR HOGENOM; CLU_019824_3_0_4; -.
DR OrthoDB; 9796052at2; -.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0022857; F:transmembrane transporter activity; IEA:UniProtKB-UniRule.
DR InterPro; IPR010656; DctM.
DR InterPro; IPR004681; TRAP_DctM.
DR PANTHER; PTHR33362; SIALIC ACID TRAP TRANSPORTER PERMEASE PROTEIN SIAT-RELATED; 1.
DR PANTHER; PTHR33362:SF7; SLL1103 PROTEIN; 1.
DR Pfam; PF06808; DctM; 1.
PE 4: Predicted;
KW Cell inner membrane {ECO:0000256|RuleBase:RU369079};
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|RuleBase:RU369079}.
FT TRANSMEM 7..28
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 34..55
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 67..85
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 105..135
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 147..171
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 186..207
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 228..253
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 273..294
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 306..329
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 335..357
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 369..388
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 408..436
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 448..474
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 500..521
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 13..524
FT /note="TRAP C4-dicarboxylate transport system permease DctM
FT subunit"
FT /evidence="ECO:0000259|Pfam:PF06808"
FT REGION 544..594
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 594 AA; 63554 MW; 385CC241A96A5CA2 CRC64;
MEFITQNFAP IMFAGLIVFL LFGFPVAFSL GACGLFFGFV GVELGLLPEA LLQALPLRVF
GIMQNDTLLA IPFFTLMGLI LERSGMAEDL LDSIGQLFGP VRGGLALAVI FVGALLAATT
GVVAASVISM GLISLPIMLR YGYDRRIASG VIAASGTLAQ IIPPSLVLII MADQLGRSVG
DMYKGAFVPG FMLTAMYAGY VILLAIFKPK WVPALPLEAR TFREPSGSSG LPSLLVLTTV
ATAAAVFFAE HIADVHTWWT GQPVTSVATD ETIVVSMCVG VMLAFLIAVA NRLLRLRLLS
RIAERVTFVL IPPLLLIFLV LGTIFLGVAT PTEGGAMGAL GAFIMAMVRG RLSMSLLKQA
LNTTTKLSCF VVFILIGSTI FSLVFQGVDG PRWVEHLLTG MPGGQLGFLI LVNVLIFFLA
FFLDFFELSF IVVPLLAPVA HKLGIDLIWF GVLLAVNMQT SFMHPPFGFA LFYLRSVAPT
KAYNDKVTNE RIEPVTTMQI YWGAVPFVLI QIIMVGLIIA FPAIVSSGLD KEVAVDLDKI
GAEMQANMPK DDSQPAPEPA PGASAPAGGE APAGAEEDPM KAMQEQLDRD AGKK
//
