ID C5CU89_VARPS Unreviewed; 291 AA.
AC C5CU89;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 73.
DE SubName: Full=Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACS20302.1};
GN OrderedLocusNames=Vapar_3686 {ECO:0000313|EMBL:ACS20302.1};
OS Variovorax paradoxus (strain S110).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS20302.1};
RN [1] {ECO:0000313|EMBL:ACS20302.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S110 {ECO:0000313|EMBL:ACS20302.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA Leadbetter J.R., Spain J.C., Han J.I.;
RT "Complete sequence of chromosome 1 of Variovorax paradoxus S110.";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|RuleBase:RU363032};
CC Multi-pass membrane protein {ECO:0000256|RuleBase:RU363032}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the binding-protein-dependent transport system
CC permease family. {ECO:0000256|RuleBase:RU363032}.
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DR EMBL; CP001635; ACS20302.1; -; Genomic_DNA.
DR AlphaFoldDB; C5CU89; -.
DR STRING; 543728.Vapar_3686; -.
DR KEGG; vap:Vapar_3686; -.
DR eggNOG; COG1175; Bacteria.
DR HOGENOM; CLU_016047_0_3_4; -.
DR OrthoDB; 8578268at2; -.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR CDD; cd06261; TM_PBP2; 1.
DR Gene3D; 1.10.3720.10; MetI-like; 1.
DR InterPro; IPR000515; MetI-like.
DR InterPro; IPR035906; MetI-like_sf.
DR PANTHER; PTHR30193; ABC TRANSPORTER PERMEASE PROTEIN; 1.
DR PANTHER; PTHR30193:SF37; INNER MEMBRANE ABC TRANSPORTER PERMEASE PROTEIN YCJO; 1.
DR Pfam; PF00528; BPD_transp_1; 1.
DR SUPFAM; SSF161098; MetI-like; 1.
DR PROSITE; PS50928; ABC_TM1; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU363032};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692,
KW ECO:0000256|RuleBase:RU363032};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|RuleBase:RU363032}; Transport {ECO:0000256|RuleBase:RU363032}.
FT TRANSMEM 26..48
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU363032"
FT TRANSMEM 68..94
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU363032"
FT TRANSMEM 103..125
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU363032"
FT TRANSMEM 159..187
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU363032"
FT TRANSMEM 208..230
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU363032"
FT TRANSMEM 266..286
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU363032"
FT DOMAIN 69..290
FT /note="ABC transmembrane type-1"
FT /evidence="ECO:0000259|PROSITE:PS50928"
SQ SEQUENCE 291 AA; 32412 MW; 5A22FB0745D13A56 CRC64;
MSSTATAAPS LAPVVNLGAR HARWQFWGAV MVVPYLLVFV VFVLYPVGYG LWLARHPQSY
VKLVEDPIFF RSVINTAIFL VVAINIKMLV ALVLSGFFVT SRWWIKIVSA IFILPWAMPS
IPTILSVRFM LNPEWGVINS TIFRLTGADG PNWLNDPSLA LALAMVVHVW KSLPFWTLIL
VAGRLAIPAE QYEAASVDGA STWQKFRFVS WPALKTLYVT SLILSMIWTL GDFNSVYLLT
GGGPADLTHV LATLGIRYLR LDQVDLSMAS IVVALPLVLP LVYFMMKRLS K
//
