ID C5CXN3_VARPS Unreviewed; 239 AA.
AC C5CXN3;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 63.
DE SubName: Full=Type III secretion system inner membrane R protein {ECO:0000313|EMBL:ACS18889.1};
DE Flags: Precursor;
GN OrderedLocusNames=Vapar_2260 {ECO:0000313|EMBL:ACS18889.1};
OS Variovorax paradoxus (strain S110).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS18889.1};
RN [1] {ECO:0000313|EMBL:ACS18889.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S110 {ECO:0000313|EMBL:ACS18889.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA Leadbetter J.R., Spain J.C., Han J.I.;
RT "Complete sequence of chromosome 1 of Variovorax paradoxus S110.";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|ARBA:ARBA00004651};
CC Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the FliR/MopE/SpaR family.
CC {ECO:0000256|ARBA:ARBA00009772}.
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DR EMBL; CP001635; ACS18889.1; -; Genomic_DNA.
DR AlphaFoldDB; C5CXN3; -.
DR STRING; 543728.Vapar_2260; -.
DR KEGG; vap:Vapar_2260; -.
DR eggNOG; COG1684; Bacteria.
DR HOGENOM; CLU_063626_4_0_4; -.
DR OMA; CPQLNAF; -.
DR OrthoDB; 8808595at2; -.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0006605; P:protein targeting; IEA:InterPro.
DR InterPro; IPR002010; T3SS_IM_R.
DR PANTHER; PTHR30065; FLAGELLAR BIOSYNTHETIC PROTEIN FLIR; 1.
DR PANTHER; PTHR30065:SF1; FLAGELLAR BIOSYNTHETIC PROTEIN FLIR; 1.
DR Pfam; PF01311; Bac_export_1; 1.
DR PRINTS; PR00953; TYPE3IMRPROT.
PE 3: Inferred from homology;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 52..75
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 95..113
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 152..174
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 195..218
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 239 AA; 25089 MW; C3A1B966C3C0F640 CRC64;
MTPIFYAVPL PASVRMLLVL GLSIALAFGL SAPVGAWMGW SELLFSALAE LALGATLGLG
ILLAFGAFSI AGQLLDVQLG FGIAQVIDPV TQRPIPVLTS AFNYLAVLVF FLLNGHHALL
RGISYSLERF PVGASWSIGH AVAPVLKQAA GLFSLGFALA APVVFCILLV EFALGVVGRN
LPQMNMFTMG IPVKILVGLV ALSFWFAGIG SVMTRAYASI ASTWDGIFVA APTPTQQGR
//