GenomeNet

Database: UniProt
Entry: C5D0G5_VARPS
LinkDB: C5D0G5_VARPS
Original site: C5D0G5_VARPS 
ID   C5D0G5_VARPS            Unreviewed;       108 AA.
AC   C5D0G5;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   24-JAN-2024, entry version 61.
DE   SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACS22509.1};
GN   OrderedLocusNames=Vapar_5937 {ECO:0000313|EMBL:ACS22509.1};
OS   Variovorax paradoxus (strain S110).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS22509.1};
RN   [1] {ECO:0000313|EMBL:ACS22509.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=S110 {ECO:0000313|EMBL:ACS22509.1};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA   Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA   Leadbetter J.R., Spain J.C., Han J.I.;
RT   "Complete sequence of chromosome 2 of Variovorax paradoxus S110.";
RL   Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP001636; ACS22509.1; -; Genomic_DNA.
DR   AlphaFoldDB; C5D0G5; -.
DR   STRING; 543728.Vapar_5937; -.
DR   KEGG; vap:Vapar_5937; -.
DR   eggNOG; COG1396; Bacteria.
DR   HOGENOM; CLU_2195798_0_0_4; -.
DR   OMA; TIRTTHQ; -.
DR   OrthoDB; 8779688at2; -.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   Pfam; PF13560; HTH_31; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   4: Predicted;
FT   DOMAIN          34..93
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   108 AA;  11524 MW;  B143E660670B5529 CRC64;
     MNSTGVKQKV IRAADPVASP PILVRGQGGL GQYVRQARKR QQLRIDDAAS LFGVSVDLVS
     RLENGAGSVR LDKLQAVLDG LGLGLVVGPK SDLQSFVDRQ KASDDERV
//
DBGET integrated database retrieval system