ID C5D1H5_VARPS Unreviewed; 301 AA.
AC C5D1H5;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 79.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS22745.1};
GN OrderedLocusNames=Vapar_6182 {ECO:0000313|EMBL:ACS22745.1};
OS Variovorax paradoxus (strain S110).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS22745.1};
RN [1] {ECO:0000313|EMBL:ACS22745.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S110 {ECO:0000313|EMBL:ACS22745.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA Leadbetter J.R., Spain J.C., Han J.I.;
RT "Complete sequence of chromosome 2 of Variovorax paradoxus S110.";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP001636; ACS22745.1; -; Genomic_DNA.
DR AlphaFoldDB; C5D1H5; -.
DR STRING; 543728.Vapar_6182; -.
DR KEGG; vap:Vapar_6182; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_6_0_4; -.
DR OrthoDB; 464481at2; -.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd05466; PBP2_LTTR_substrate; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30126:SF96; HTH-TYPE TRANSCRIPTIONAL REGULATOR ABGR; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..58
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 301 AA; 32689 MW; 8B7DB5342D202917 CRC64;
MRLEDLDVFR AVHETGNFQR AALRCGLSQS AVTKVVRKLE DEFGVQLMER GGRSLALTPA
GRTLYLRAME LSALTIATRR DMAGEVAAMR GAIRLGIVPA LLGSVAAPVL ADMLPGPHPV
QLLVSVKHSA ELVRMLEEGK LDLAVCFGVQ HLPPDVLRTR VGPQRYRLVV RAGHPLAGSI
PSLEQLSKSR WLLPTSDVTL RTEVEQMFAN AGLGALDVRV ETDTSATLMI PLLRRSDLIT
VLPEQAFQPL AGEGLAALDV DLHALTGEVT VYHRRKTPSV GLLMELKHRL EAQARSNSLS
G
//
