ID C5D1K3_VARPS Unreviewed; 293 AA.
AC C5D1K3;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 77.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS22773.1};
GN OrderedLocusNames=Vapar_6210 {ECO:0000313|EMBL:ACS22773.1};
OS Variovorax paradoxus (strain S110).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS22773.1};
RN [1] {ECO:0000313|EMBL:ACS22773.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S110 {ECO:0000313|EMBL:ACS22773.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA Leadbetter J.R., Spain J.C., Han J.I.;
RT "Complete sequence of chromosome 2 of Variovorax paradoxus S110.";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP001636; ACS22773.1; -; Genomic_DNA.
DR AlphaFoldDB; C5D1K3; -.
DR STRING; 543728.Vapar_6210; -.
DR KEGG; vap:Vapar_6210; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_16_2_4; -.
DR OMA; VGRCFAK; -.
DR OrthoDB; 9810065at2; -.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08422; PBP2_CrgA_like; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30537:SF5; LYSR_SUBSTRATE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
FT DOMAIN 1..58
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 293 AA; 31405 MW; C66E594E465F457E CRC64;
MDLNALTDFA LVAANGGLGK ASRASGRSKA TLSRRIADLE EQLGVRLIER SARGLKLTEA
GQMLMDRTEG PMHEVADAMT SAREGLSVPR GRLRIASPVL FSQLAMGRIG AEFCAAYPEV
SCEVVADDRL VDLVEEQFDA AIRINPSPDS SLVGRCFAKD RLVVVAAPSV PMPKRGKGKV
SAVPGVVATT FQGGNWTLDD GRLVVEPVPR LRLSSFLMIR DAAVAGAGAA LIPQSIAWNQ
LTRGELVQWG MVSGVEVALW VLHTSRRLPA PKVRAFVDFM CEQYPQGSLV LNG
//