ID C5KJD7_PERM5 Unreviewed; 367 AA.
AC C5KJD7;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 66.
DE SubName: Full=Pre-mRNA-splicing factor SLT11, putative {ECO:0000313|EMBL:EER15439.1};
GN ORFNames=Pmar_PMAR018791 {ECO:0000313|EMBL:EER15439.1};
OS Perkinsus marinus (strain ATCC 50983 / TXsc).
OC Eukaryota; Sar; Alveolata; Perkinsozoa; Perkinsea; Perkinsida; Perkinsidae;
OC Perkinsus.
OX NCBI_TaxID=423536 {ECO:0000313|Proteomes:UP000007800};
RN [1] {ECO:0000313|EMBL:EER15439.1, ECO:0000313|Proteomes:UP000007800}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 50983 / TXsc {ECO:0000313|Proteomes:UP000007800};
RA El-Sayed N., Caler E., Inman J., Amedeo P., Hass B., Wortman J.;
RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; GG673601; EER15439.1; -; Genomic_DNA.
DR RefSeq; XP_002783643.1; XM_002783597.1.
DR AlphaFoldDB; C5KJD7; -.
DR EnsemblProtists; EER15439; EER15439; Pmar_PMAR018791.
DR GeneID; 9046182; -.
DR InParanoid; C5KJD7; -.
DR OMA; RNNCQRN; -.
DR OrthoDB; 929875at2759; -.
DR Proteomes; UP000007800; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR039171; Cwc2/Slt11.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR048995; STL11/RBM22-like_N.
DR InterPro; IPR032297; Torus.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR14089; PRE-MRNA-SPLICING FACTOR RBM22; 1.
DR PANTHER; PTHR14089:SF6; PRE-MRNA-SPLICING FACTOR RBM22; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF21369; STL11_N; 1.
DR Pfam; PF16131; Torus; 1.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000007800};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 156..183
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 229..305
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT ZN_FING 156..183
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 343..367
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 367 AA; 40396 MW; D04C40E5041A552E CRC64;
MGERGEQIVS GVNHIGAEEA TFPIVCETCL GDNPYVRMQK EPMGDECKIC ERPYTMFRWK
AGSKGRYKQT VLCQNCARMK NVCQVCIFDL DFGLPVQVRD KFLSEAEKLS LPESTVGRDY
QALNNSQNAN PALTYGKLKH HPMLQKLART APYYERNQAR ICSFFVKGTC NRGDECPYRH
EMPKPEGNDL NDQNIRDRYH GTDDPVAKKI LKQAAEKFQL EAPEDTSITT LYIGGIDPNA
QIGESNIRAE FEEFGQIDSI VLVEKSNCAF VEFTGRQSAE KAAAEKGGSN LVINGARLRV
SWAKPKSGGL SAGSSALVKA AAEGSAVKQT VLAPAGSGVY PSMNPMVHGN APIPQATPEQ
RARQEKQ
//
