ID C5LIW9_PERM5 Unreviewed; 171 AA.
AC C5LIW9;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE SubName: Full=Small nuclear ribonucleoprotein, putative {ECO:0000313|EMBL:EER03304.1};
GN ORFNames=Pmar_PMAR000541 {ECO:0000313|EMBL:EER03304.1};
OS Perkinsus marinus (strain ATCC 50983 / TXsc).
OC Eukaryota; Sar; Alveolata; Perkinsozoa; Perkinsea; Perkinsida; Perkinsidae;
OC Perkinsus.
OX NCBI_TaxID=423536 {ECO:0000313|Proteomes:UP000007800};
RN [1] {ECO:0000313|EMBL:EER03304.1, ECO:0000313|Proteomes:UP000007800}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 50983 / TXsc {ECO:0000313|Proteomes:UP000007800};
RA El-Sayed N., Caler E., Inman J., Amedeo P., Hass B., Wortman J.;
RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the snRNP SmB/SmN family.
CC {ECO:0000256|ARBA:ARBA00009123}.
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DR EMBL; GG682245; EER03304.1; -; Genomic_DNA.
DR RefSeq; XP_002771488.1; XM_002771442.1.
DR AlphaFoldDB; C5LIW9; -.
DR EnsemblProtists; EER03304; EER03304; Pmar_PMAR000541.
DR GeneID; 9047315; -.
DR InParanoid; C5LIW9; -.
DR OMA; MGTTKMV; -.
DR OrthoDB; 5475294at2759; -.
DR Proteomes; UP000007800; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR CDD; cd01717; Sm_B; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR PANTHER; PTHR10701:SF0; SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B; 1.
DR PANTHER; PTHR10701; SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000007800};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000313|EMBL:EER03304.1}.
FT DOMAIN 5..89
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
FT REGION 85..109
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 131..171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 138..165
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 171 AA; 18084 MW; 7AC5B914CE13AFE2 CRC64;
MPAVGRNTKM QQWLNYRVRV TLHDGRIMIG QFMAFDKHMN LVLADTEEFR KVRSKGESGL
GEEREVKRML GLLILRGENI ISMTAEAPPP NVKKSEGPLA GPGRGHAAGR GVPIAPLGQA
PQGLTGPIRG VGGPAPAQMA PGAPPGMPPM PGFPGMPPPP PGMMQGMPGH H
//
