ID C5MKB5_BRAOL Unreviewed; 380 AA.
AC C5MKB5;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 68.
DE SubName: Full=BREVIPEDICELLUS {ECO:0000313|EMBL:ACS28250.1};
DE Flags: Fragment;
OS Brassica oleracea (Wild cabbage).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3712 {ECO:0000313|EMBL:ACS28250.1};
RN [1] {ECO:0000313|EMBL:ACS28250.1}
RP NUCLEOTIDE SEQUENCE.
RA Dumonceaux T.J., Venglat S.P., Kushalappa K., Selvaraj G., Datla R.;
RT "Molecular and functional characterization of Brassica BREVIPEDICELLUS
RT orthologs involved in inflorescence architecture.";
RL Can. J. Bot. 86:604-615(2009).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108}.
CC -!- SIMILARITY: Belongs to the TALE/KNOX homeobox family.
CC {ECO:0000256|PROSITE-ProRule:PRU00559}.
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DR EMBL; GQ120449; ACS28250.1; -; Genomic_DNA.
DR AlphaFoldDB; C5MKB5; -.
DR ExpressionAtlas; C5MKB5; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0042802; F:identical protein binding; IEA:EnsemblPlants.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IEA:EnsemblPlants.
DR GO; GO:0001708; P:cell fate specification; IEA:EnsemblPlants.
DR GO; GO:0010051; P:xylem and phloem pattern formation; IEA:EnsemblPlants.
DR GO; GO:0010089; P:xylem development; IEA:EnsemblPlants.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR005539; ELK_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR008422; Homeobox_KN_domain.
DR InterPro; IPR005540; KNOX1.
DR InterPro; IPR005541; KNOX2.
DR PANTHER; PTHR11850:SF102; HOMEOBOX PROTEIN HOMOTHORAX; 1.
DR PANTHER; PTHR11850; HOMEOBOX PROTEIN TRANSCRIPTION FACTORS; 1.
DR Pfam; PF03789; ELK; 1.
DR Pfam; PF05920; Homeobox_KN; 1.
DR Pfam; PF03790; KNOX1; 1.
DR Pfam; PF03791; KNOX2; 1.
DR SMART; SM01188; ELK; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM01255; KNOX1; 1.
DR SMART; SM01256; KNOX2; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS51213; ELK; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}.
FT DOMAIN 261..281
FT /note="ELK"
FT /evidence="ECO:0000259|PROSITE:PS51213"
FT DOMAIN 281..344
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 282..345
FT /note="Homeobox; TALE-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 1..45
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 224..255
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 8..45
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ACS28250.1"
SQ SEQUENCE 380 AA; 43744 MW; D8CA3C5ACAE5163C CRC64;
HESRSTPHRV SFLYSPISSS NKNDNTTTNN NNTNYGSGYN NTNNNNHQQH MLFPHMSSLL
PQTTENCFRS DHDQPTNASV KSEASSSRIN HYSMLMKAIH NTQETNNNNN DTESMKAKII
AHPHYSTLLH AYLDCQKIGA PPEVVDKITA ARQEFEARQQ RPTASVTALS RDPELDQFME
AYCDMLVKYR EELTRPIEEA MEYIRRIESQ ISMLCQGPIH ILNNPDGKSE GIESSDEEQD
NNNSGGEAEL PEIDPRAEDR ELKNHLLKKY SGYLSSLKQE LSKKKKKGKL PKEARQKLLT
WWELHYKWPY PSESEKVALA ESTGLDQKQI NNWFINQRKR HWKPSEDMQF MVMDGLQHPH
HAALYMDGHY MGDGPYRLGP
//
