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Database: UniProt
Entry: C5X0D5_SORBI
LinkDB: C5X0D5_SORBI
Original site: C5X0D5_SORBI 
ID   C5X0D5_SORBI            Unreviewed;       235 AA.
AC   C5X0D5;
DT   01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   01-SEP-2009, sequence version 1.
DT   24-JAN-2024, entry version 65.
DE   RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN   ORFNames=SORBI_3001G234300 {ECO:0000313|EMBL:EER91552.1};
OS   Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX   NCBI_TaxID=4558 {ECO:0000313|EMBL:EER91552.1, ECO:0000313|Proteomes:UP000000768};
RN   [1] {ECO:0000313|EMBL:EER91552.1, ECO:0000313|Proteomes:UP000000768}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX   PubMed=19189423; DOI=10.1038/nature07723;
RA   Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA   Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA   Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA   Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA   Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA   Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA   Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA   Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT   "The Sorghum bicolor genome and the diversification of grasses.";
RL   Nature 457:551-556(2009).
RN   [2] {ECO:0000313|Proteomes:UP000000768}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX   PubMed=29161754; DOI=10.1111/tpj.13781;
RA   McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA   Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA   Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT   "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT   a transcriptome atlas, and signatures of genome organization.";
RL   Plant J. 93:338-354(2018).
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DR   EMBL; CM000760; EER91552.1; -; Genomic_DNA.
DR   RefSeq; XP_002464554.1; XM_002464509.1.
DR   AlphaFoldDB; C5X0D5; -.
DR   STRING; 4558.C5X0D5; -.
DR   EnsemblPlants; EER91552; EER91552; SORBI_3001G234300.
DR   GeneID; 8071385; -.
DR   Gramene; EER91552; EER91552; SORBI_3001G234300.
DR   KEGG; sbi:8071385; -.
DR   eggNOG; KOG1039; Eukaryota.
DR   HOGENOM; CLU_059830_3_0_1; -.
DR   InParanoid; C5X0D5; -.
DR   OMA; MFISKLP; -.
DR   OrthoDB; 337585at2759; -.
DR   Proteomes; UP000000768; Chromosome 1.
DR   GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR   GO; GO:0016567; P:protein ubiquitination; IBA:GO_Central.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR001841; Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR15315:SF36; OS10G0445400 PROTEIN; 1.
DR   PANTHER; PTHR15315; RING FINGER PROTEIN 41, 151; 1.
DR   Pfam; PF13639; zf-RING_2; 1.
DR   SMART; SM00184; RING; 1.
DR   SUPFAM; SSF57850; RING/U-box; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT   DOMAIN          138..176
FT                   /note="RING-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50089"
FT   COILED          1..28
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   235 AA;  27359 MW;  001184D89C279A2B CRC64;
     MRKFQDSVKA LQADIDHANE LASEFLRDYD GSVIQMRMAY SAVAHFLVQW TDCKLAGALG
     LLKVMLYKVY ADDSSALPDW EREASIREFY GIIFPSLLLL PSGITELDDR KQRKLCLKKF
     RSRDEQLSEV DTERELECGI CLEVSRKIVL PDCAHTLCMR CFEDWNEKSK SCPFCRACLE
     EVKPGSLWMY TDDSDVVDMD TLTRENIRRL FMYINKLPLV VLHVVDLDIY EYRIK
//
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