ID C5X2Z9_SORBI Unreviewed; 643 AA.
AC C5X2Z9;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 68.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3002G231200 {ECO:0000313|EMBL:EER99032.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EER99032.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EER99032.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000761; EER99032.1; -; Genomic_DNA.
DR RefSeq; XP_002462511.1; XM_002462466.1.
DR AlphaFoldDB; C5X2Z9; -.
DR STRING; 4558.C5X2Z9; -.
DR EnsemblPlants; EER99032; EER99032; SORBI_3002G231200.
DR GeneID; 8083251; -.
DR Gramene; EER99032; EER99032; SORBI_3002G231200.
DR KEGG; sbi:8083251; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR InParanoid; C5X2Z9; -.
DR OMA; CMKVFDK; -.
DR OrthoDB; 467712at2759; -.
DR Proteomes; UP000000768; Chromosome 2.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47931; OS01G0228400 PROTEIN; 1.
DR PANTHER; PTHR47931:SF2; OS01G0228400 PROTEIN; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 3.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 9.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 141..175
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 176..210
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 212..246
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 281..315
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 316..350
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 351..385
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 386..420
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 421..455
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 456..490
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 24..53
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 643 AA; 71908 MW; 8098FAF86A53814B CRC64;
MVIMVENGVQ LTLTSTLKST GKTRISADGL NNGNGSQTTK EKHEYNGTLQ PSKGQKPQLC
TTCAKGHTCQ SVINRTRQMR ALIDSNKPYQ AHSVFKHLME EGHKPSLVTY TILLTALTNQ
RMFESIPSLL AQVELAGIRP DSIFFNALIN AFVEAKRMGE AINTFWKMKH SGCHPTTSTF
NTLIKGYGIV GKPEESQRVF DMMGIEGSIK PNLTTYNILV KAWCDRRNLE EAWGVVGKMR
AGGVEPDIVT YNTIASAYAN NDETWRAEEL IVEIQTRVRT SERTWGIIIG GYCRESRLEE
ALRCVQQMKD AGIVPNVVIF NTLLKGFLDV NDMAAVNNIL GLMEQFGIKP DIVTYSHQLN
TFSSLGHMAK CMKVFDKMIE AGIEPDPQVY SILAKGFVRA KQPEKAEDLL LQMSHLGVCP
NVVTFTTVIS GWCSVADMES AMRVYEKMCK SGVYPNLRTF ETLIWGYSEQ KQPWKAEEVL
QMMRETGVKP KESTHRLIAD AWKAVGLIEN INNSNGSPNG PYAIDKLDDS DDNCNVQISE
DDNKLQSFDE SKGRAMNGRS RSSFLQITNA LGCGGIVSAK VLKVGEFPSE RLKAIKNTSF
LQRSQRFQLL HLEFCRKQLK NGGFYSQSIS SFKMVFSSRG YIY
//
