ID C5X9A3_SORBI Unreviewed; 463 AA.
AC C5X9A3;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3002G310000 {ECO:0000313|EMBL:EER99416.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EER99416.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EER99416.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000761; EER99416.1; -; Genomic_DNA.
DR RefSeq; XP_002462895.1; XM_002462850.1.
DR AlphaFoldDB; C5X9A3; -.
DR EnsemblPlants; EER99416; EER99416; SORBI_3002G310000.
DR GeneID; 8080713; -.
DR Gramene; EER99416; EER99416; SORBI_3002G310000.
DR KEGG; sbi:8080713; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_26_1; -.
DR InParanoid; C5X9A3; -.
DR OMA; TYRECDS; -.
DR OrthoDB; 396613at2759; -.
DR Proteomes; UP000000768; Chromosome 2.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47939; MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE; 1.
DR PANTHER; PTHR47939:SF1; OS04G0684500 PROTEIN; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 5.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 255..289
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 290..324
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 325..359
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 360..395
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 396..430
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 463 AA; 50805 MW; 0FEE843AA2466E55 CRC64;
MAAAAGTRCR DPTADPTSQF FVDAAHPYAV AAATALTSHR TKSKWSHLSS VPVPSPLPAS
ATAAVLLLLR HRPHTALRFH AFALRRLLPS RSPPPLVFSA SAAHVAAASR LRGAALTVLA
SASRHYSPAQ IFNALAATYR RFASAPFVFD LLLLAYLRSR RDALAAASVA RRILAAGARP
LPSTAAALLR SLPSATAALD MYHQIYTHPS PRSNHLLLPT VHTFNSLLLA FHREGKCDGF
KIVLQEMGKY SCKHNVCTYS IMMAEYCNGG HVEKARALWD EMIQEGIQPD VTAYNTMIGG
YCHSGEVGMA EEMFKNMLMG EIDPSATTYE WLVRGHCMSR DAEAAMLVRA DMKRRGFGLA
PEAIEELLDG LCQNGRVEDG LGVLREEMKR EEFVPTRRSY EVLIRGFCGE GEVEVAIRLQ
AEMAGKGFNA GSEVYHAFIS AYEKSENYEM VEKLRKEMAV MDT
//
