ID C5XB38_SORBI Unreviewed; 307 AA.
AC C5XB38;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 67.
DE RecName: Full=GH18 domain-containing protein {ECO:0000259|PROSITE:PS51910};
GN ORFNames=SORBI_3002G055600 {ECO:0000313|EMBL:EER98073.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EER98073.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EER98073.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000761; EER98073.1; -; Genomic_DNA.
DR RefSeq; XP_002461552.1; XM_002461507.1.
DR AlphaFoldDB; C5XB38; -.
DR STRING; 4558.C5XB38; -.
DR EnsemblPlants; EER98073; EER98073; SORBI_3002G055600.
DR GeneID; 8060751; -.
DR Gramene; EER98073; EER98073; SORBI_3002G055600.
DR KEGG; sbi:8060751; -.
DR eggNOG; KOG4701; Eukaryota.
DR HOGENOM; CLU_007818_0_0_1; -.
DR InParanoid; C5XB38; -.
DR OMA; YTMVTIS; -.
DR OrthoDB; 346533at2759; -.
DR Proteomes; UP000000768; Chromosome 2.
DR GO; GO:0005576; C:extracellular region; IBA:GO_Central.
DR GO; GO:0004568; F:chitinase activity; IBA:GO_Central.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd02877; GH18_hevamine_XipI_class_III; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR InterPro; IPR045321; Cts1-like.
DR InterPro; IPR001223; Glyco_hydro18_cat.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR PANTHER; PTHR45708; ENDOCHITINASE; 1.
DR PANTHER; PTHR45708:SF9; XYLANASE INHIBITOR PROTEIN 1; 1.
DR Pfam; PF00704; Glyco_hydro_18; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR PROSITE; PS51910; GH18_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..35
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 36..307
FT /note="GH18 domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002956122"
FT DOMAIN 41..307
FT /note="GH18"
FT /evidence="ECO:0000259|PROSITE:PS51910"
SQ SEQUENCE 307 AA; 33647 MW; 3F400B28DE89E40A CRC64;
MAAPAFGGRR RPASAAALLA VATLVVVFLA GPAMAAGNKT GQVTVFWGRN KAEGTLREAC
DSGLYTMVIM SFLDVYGPNG KYHLDLSGHP IAGIGDDIKH CQFVGVPVSL SIGGFGSGYS
LPSKQAALDL FDYLWNAFFG GSKPGVHRPF GDVWLDGVDL FLEHGTNATD RYDVLALELA
KHNIRGGPGK PLHLTATPRC EFPPAGYLKR ALDTGIFERV HVRIYDDADC EAYWHLAWDR
WTAAYPATRF YVGMTASETT HGWVHPKNVY YDVAPSVQKA DNYGGFMIWE RYADTLSNYT
SMVKYYA
//
