ID C5XS65_SORBI Unreviewed; 757 AA.
AC C5XS65;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 70.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3004G007700 {ECO:0000313|EMBL:EES06126.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES06126.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES06126.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000763; EES06126.1; -; Genomic_DNA.
DR RefSeq; XP_002453150.1; XM_002453105.1.
DR AlphaFoldDB; C5XS65; -.
DR STRING; 4558.C5XS65; -.
DR EnsemblPlants; EES06126; EES06126; SORBI_3004G007700.
DR GeneID; 8085185; -.
DR Gramene; EES06126; EES06126; SORBI_3004G007700.
DR KEGG; sbi:8085185; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_24_1; -.
DR InParanoid; C5XS65; -.
DR OMA; MIRRRPW; -.
DR OrthoDB; 466167at2759; -.
DR Proteomes; UP000000768; Chromosome 4.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0009409; P:response to cold; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47932; ATPASE EXPRESSION PROTEIN 3; 1.
DR PANTHER; PTHR47932:SF63; OS08G0290000 PROTEIN; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 8.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 180..214
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 215..249
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 250..284
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 285..319
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 320..354
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 355..390
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 428..462
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 504..538
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 22..77
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 757 AA; 82706 MW; 774F58E1DB916E2C CRC64;
MARRHLASTL HLPLLCRNPS APTSALCTSS STHEVPPPAV EAPPLPVQVP AEKPADEAAA
AAVPSPSAPT NPPRREEPLH ETILHMIRRR PWTTRLENSI RLLSPTLDAP LVHGVISGAA
SAGRAELALQ FFRFAYRRGG FRPDGDTFAL LVPALASRRM LNHARCLVLD TMPSFSVAPD
EPTLAALISA YGRAAIPQEA VKLFRMMPDL GVPRTALSYN AVLKAILCRG REAMARRIYN
AMIADGVAPD VSTYNTLIWG FGLCKKMETA VRVFGEMKGH GVTPDVTTYN ALLNAWVRTG
DLESARKVFD EMTGKGIERN SVSYNVMIKG YVEGNRVEEA VALFAEMGEK GLRLSEKTFA
ALMPGLCDDQ GRAAEARKAV DDMAERRLTP KDKSVFLRLV TTLCKAGDLD GALEVHRKSG
QFKHVLVDPR QYGVLMEGLC AGGKSEMAIE VLDELMEKGT LLSPKSPVLE ASAYNPVIEH
LCSNGSTTKA ETFFRQLMKK GVDDKAAFNS LIRGHAKEGV PEAAQEILAI MTRREVPTDP
ESHVLLVDSF LKKNEPADAK TALDSMMQHG HLPSPALFKS VMEALFNDGR IQTASRVMKS
MIEKGVTENM DMAHKILEAL FTRGHVEEAI GRVNLMVENG CMPDLDKLLV GLCDNDRVME
AQKLADFALD RDFDVSFSTY DRVLEALYAE EKTLPAYSML CKIKNKGGVV DQKGCDALME
SLKSEGYSKQ ADILSRILAE NSQSMSKRGG KKVAMGA
//