ID C5XTP9_SORBI Unreviewed; 770 AA.
AC C5XTP9;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 2.
DT 24-JAN-2024, entry version 79.
DE RecName: Full=Anaphase-promoting complex subunit 4 {ECO:0000256|ARBA:ARBA00016067};
GN ORFNames=SORBI_3004G322300 {ECO:0000313|EMBL:EES05908.2};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES05908.2, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES05908.2, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000763; EES05908.2; -; Genomic_DNA.
DR AlphaFoldDB; C5XTP9; -.
DR STRING; 4558.C5XTP9; -.
DR EnsemblPlants; EES05908; EES05908; SORBI_3004G322300.
DR Gramene; EES05908; EES05908; SORBI_3004G322300.
DR eggNOG; KOG1116; Eukaryota.
DR eggNOG; KOG4640; Eukaryota.
DR HOGENOM; CLU_006349_0_0_1; -.
DR InParanoid; C5XTP9; -.
DR OMA; HCKLFVP; -.
DR OrthoDB; 1211942at2759; -.
DR Proteomes; UP000000768; Chromosome 4.
DR GO; GO:0005680; C:anaphase-promoting complex; IBA:GO_Central.
DR GO; GO:0034399; C:nuclear periphery; IBA:GO_Central.
DR GO; GO:0031145; P:anaphase-promoting complex-dependent catabolic process; IBA:GO_Central.
DR GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0070979; P:protein K11-linked ubiquitination; IBA:GO_Central.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR024789; APC4.
DR InterPro; IPR024977; Apc4-like_WD40_dom.
DR InterPro; IPR024790; APC4_long_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR13260; ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4; 1.
DR PANTHER; PTHR13260:SF0; ANAPHASE-PROMOTING COMPLEX SUBUNIT 4; 1.
DR Pfam; PF12896; ANAPC4; 1.
DR Pfam; PF12894; ANAPC4_WD40; 1.
DR SMART; SM00320; WD40; 2.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
PE 4: Predicted;
KW Cell cycle {ECO:0000256|ARBA:ARBA00023306};
KW Cell division {ECO:0000256|ARBA:ARBA00022618};
KW Mitosis {ECO:0000256|ARBA:ARBA00022776};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT DOMAIN 35..120
FT /note="Anaphase-promoting complex subunit 4-like WD40"
FT /evidence="ECO:0000259|Pfam:PF12894"
FT REPEAT 71..105
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 265..464
FT /note="Anaphase-promoting complex subunit 4 long"
FT /evidence="ECO:0000259|Pfam:PF12896"
SQ SEQUENCE 770 AA; 85220 MW; B8938272C1924653 CRC64;
MVEEQMEEAS TAPAAATPFQ LQFDKPIPFQ IKLAEWNPEK DLLAMVTDDS KVILHRFNWQ
RLWTISPGKC ITSICWSPDG KIIALGTEDG LVLLHDVENG KMLRTTKSHD VAIVCLNWAE
DDPLSRPEKD EFLSYEDRTT RFFPPAPVMP RVGGLSSGDT GLADENEEAI PEFFSASCQR
FNILCSGGKD GCVCFSIFGI FPVGKINITK IPINVGSSGK SYQLQDASVS EVSLSRNLQK
LVLLCFGKLV DTDNLSHSCG SSGLHCLYLD TSIFFNRKNE LHQVSQQASS IQDLVEVVRA
SVSLISKQWS NAMGLFRVQF SALPNLISAH GVESTSEDEF LSLLFGTRTS PALHQFLASS
LGEAGLKRIA KAVDSAGRDI RGIITEHLQP AVEMISFRLS ELRGLARWRS RFQIIGLDEK
LIDGVTESIG MLVVQVERFS RVAATVVYLF QNFFAWVLKS VKILLNEPTD QVPAANSELV
VIFLKFLLDK DPIKQLLEAD EIIECDMDTA RHVEQLVVFG GFTDTQFLEK SLVKQFNELE
DSLKEAFLMP FTTISSQIQC QGLLPLYPVT SSVNLSSSCT PTSISFYKDE DSPHGESSYS
LTDYVCFKIP DGSLNKRNCI GVIKDSGNCC TALSMASLSG FLLHIPDEYE CVDLSLYKDN
QVVLLLSETS CSDSPGKSWM VMLQTENFSF MPLSGTFPAN IYSLQKLVAL DLQLDADYGK
VRSIPHTVST PLAVSASRGV ACVFSSRRHA LVYILDEDEE EEGDEISDME
//
