ID C5XVQ3_SORBI Unreviewed; 619 AA.
AC C5XVQ3;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 2.
DT 27-MAR-2024, entry version 71.
DE RecName: Full=Galectin domain-containing protein {ECO:0000259|PROSITE:PS51304};
GN ORFNames=SORBI_3004G190800 {ECO:0000313|EMBL:EES05309.2};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES05309.2, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES05309.2, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|EMBL:EES05309.2}
RP NUCLEOTIDE SEQUENCE.
RA Paterson A., Mullet J., Bowers J., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A., Chapman J., Feltus F.,
RA Gowik U., Grigoriev I., Lyons E., Maher C., Martis M., Narechania A.,
RA Otillar R., Penning B., Salamov A., Wang Y., Zhang L., Carpita N.,
RA Freeling M., Gingle A., Hash C., Keller B., Klein P., Kresovich S.,
RA Mccann M., Ming R., Peterson D., Rahman M., Ware D., Westhoff P., Mayer K.,
RA Messing J., Sims D., Jenkins J., Shu S., Rokhsar D.;
RT "WGS assembly of Sorghum bicolor.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- COFACTOR:
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC Evidence={ECO:0000256|ARBA:ARBA00001936};
CC -!- PATHWAY: Protein modification; protein glycosylation.
CC {ECO:0000256|ARBA:ARBA00004922}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane
CC {ECO:0000256|ARBA:ARBA00004323}; Single-pass type II membrane protein
CC {ECO:0000256|ARBA:ARBA00004323}. Membrane
CC {ECO:0000256|ARBA:ARBA00004606}; Single-pass type II membrane protein
CC {ECO:0000256|ARBA:ARBA00004606}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 31 family.
CC {ECO:0000256|ARBA:ARBA00008661}.
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DR EMBL; CM000763; EES05309.2; -; Genomic_DNA.
DR EMBL; CM000763; OQU85196.1; -; Genomic_DNA.
DR EMBL; CM000763; OQU85197.1; -; Genomic_DNA.
DR AlphaFoldDB; C5XVQ3; -.
DR STRING; 4558.C5XVQ3; -.
DR EnsemblPlants; EES05309; EES05309; SORBI_3004G190800.
DR EnsemblPlants; OQU85196; OQU85196; SORBI_3004G190800.
DR EnsemblPlants; OQU85197; OQU85197; SORBI_3004G190800.
DR Gramene; EES05309; EES05309; SORBI_3004G190800.
DR Gramene; OQU85196; OQU85196; SORBI_3004G190800.
DR Gramene; OQU85197; OQU85197; SORBI_3004G190800.
DR eggNOG; KOG2287; Eukaryota.
DR HOGENOM; CLU_000680_33_0_1; -.
DR InParanoid; C5XVQ3; -.
DR OMA; AWENLTI; -.
DR OrthoDB; 532757at2759; -.
DR UniPathway; UPA00378; -.
DR Proteomes; UP000000768; Chromosome 4.
DR GO; GO:0000139; C:Golgi membrane; IBA:GO_Central.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0008378; F:galactosyltransferase activity; IBA:GO_Central.
DR GO; GO:0006486; P:protein glycosylation; IEA:UniProtKB-UniPathway.
DR CDD; cd00070; GLECT; 1.
DR Gene3D; 2.60.120.200; -; 1.
DR Gene3D; 3.90.550.50; -; 1.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR001079; Galectin_CRD.
DR InterPro; IPR002659; Glyco_trans_31.
DR PANTHER; PTHR11214; BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE; 1.
DR PANTHER; PTHR11214:SF133; OS02G0577300 PROTEIN; 1.
DR Pfam; PF00337; Gal-bind_lectin; 1.
DR Pfam; PF01762; Galactosyl_T; 1.
DR SMART; SM00908; Gal-bind_lectin; 1.
DR SMART; SM00276; GLECT; 1.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
DR PROSITE; PS51304; GALECTIN; 1.
PE 3: Inferred from homology;
KW Glycosyltransferase {ECO:0000256|ARBA:ARBA00022676};
KW Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Signal {ECO:0000256|SAM:SignalP};
KW Signal-anchor {ECO:0000256|ARBA:ARBA00022968};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT SIGNAL 1..21
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 22..619
FT /note="Galectin domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5008412395"
FT DOMAIN 157..341
FT /note="Galectin"
FT /evidence="ECO:0000259|PROSITE:PS51304"
SQ SEQUENCE 619 AA; 69442 MW; 99941D32C400FBA4 CRC64;
MWMTKKLAIT VLLMLTSLLT ARYLIEHSAN SGISRYQILH LVHLDWFKSP ADARETTTLE
VAVVTTADAP PASNSSDSRN SSPEVFQWLY TWNQMKQLAN ITNGLPHASE AISDGRTAWE
NLTASVQNAS SQHREKERLC PYSIRRMDAS KSENGIFTID VPCGLIVGSS ITLIGTPGVL
SGNFWIDLVG TALPGESEKP IALHYNVRLN GDKVTKDPVI VQNTFTANNG WGVEDRCPST
NYSNATEVED LERCNAMVGT EEDINNSKHH TAAKHGEPSK YFPFKQGYLA IATLRVGSEG
IHMTVDGKHV TSFAYRAGLE PWYVTEVGIS GDFKLVSAIV SGLPTSEDLE NSNIEALKSP
PIPDDKDVDL LIGIFSTANN FKRRMAIRRT WMQYDAVRQG AVAVRFFVGL HTNLMVNEEL
WNEAQTYGDI QVLPFVDYYS LITWKTLAIC IYGTSSLSAK YLMKTDDDAF VRVDEIQSTV
KQLNVSHGLL YGRINSDSSP HRNPESKWYI SEEEWPEEKY PPWAHGPGYV VSQDIARAIN
NWYKASRLKM FKLEDVAMGI WVNDMKKDGL PVKYETDKRI NIDGCNDGYV VAHYQEPRHL
LCMWEKLLTT QQAECCSTK
//
