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Database: UniProt
Entry: C5XXB5_SORBI
LinkDB: C5XXB5_SORBI
Original site: C5XXB5_SORBI 
ID   C5XXB5_SORBI            Unreviewed;       682 AA.
AC   C5XXB5;
DT   01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   01-SEP-2009, sequence version 1.
DT   24-JAN-2024, entry version 68.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0000259|Pfam:PF17177};
GN   ORFNames=SORBI_3004G212100 {ECO:0000313|EMBL:EES05410.1};
OS   Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX   NCBI_TaxID=4558 {ECO:0000313|EMBL:EES05410.1, ECO:0000313|Proteomes:UP000000768};
RN   [1] {ECO:0000313|EMBL:EES05410.1, ECO:0000313|Proteomes:UP000000768}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX   PubMed=19189423; DOI=10.1038/nature07723;
RA   Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA   Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA   Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA   Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA   Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA   Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA   Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA   Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT   "The Sorghum bicolor genome and the diversification of grasses.";
RL   Nature 457:551-556(2009).
RN   [2] {ECO:0000313|Proteomes:UP000000768}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX   PubMed=29161754; DOI=10.1111/tpj.13781;
RA   McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA   Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA   Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT   "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT   a transcriptome atlas, and signatures of genome organization.";
RL   Plant J. 93:338-354(2018).
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DR   EMBL; CM000763; EES05410.1; -; Genomic_DNA.
DR   RefSeq; XP_002452434.1; XM_002452389.1.
DR   AlphaFoldDB; C5XXB5; -.
DR   STRING; 4558.C5XXB5; -.
DR   EnsemblPlants; EES05410; EES05410; SORBI_3004G212100.
DR   GeneID; 8059671; -.
DR   Gramene; EES05410; EES05410; SORBI_3004G212100.
DR   KEGG; sbi:8059671; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_433038_0_0_1; -.
DR   InParanoid; C5XXB5; -.
DR   OMA; KRADWMA; -.
DR   OrthoDB; 1114552at2759; -.
DR   Proteomes; UP000000768; Chromosome 4.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR033443; PPR_long.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 4.
DR   PANTHER; PTHR46862:SF2; OS02G0611400 PROTEIN; 1.
DR   PANTHER; PTHR46862; OS07G0661900 PROTEIN; 1.
DR   Pfam; PF01535; PPR; 1.
DR   Pfam; PF13812; PPR_3; 1.
DR   Pfam; PF17177; PPR_long; 1.
DR   PROSITE; PS51375; PPR; 4.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   REPEAT          342..376
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          377..411
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          396..516
FT                   /note="Pentacotripeptide-repeat region of PRORP"
FT                   /evidence="ECO:0000259|Pfam:PF17177"
FT   REPEAT          412..446
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          449..483
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   COILED          568..626
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   682 AA;  77364 MW;  6689777E29B74FD1 CRC64;
     MRALLSLSRL ARRVPASLAP VSAPTTFLLR HIHADVPPPP PPPPPHDSPL FVSRILESEP
     SLTPNAESEP ASDPILDEFL ARFVAAFRPR LTAAFPNHDR DVLDEMLRLV ADAVLCRLTG
     ADRGPDAIEL NDDLWAVVWE VSASVREAMR RDQVRADLRQ YLHCDEVKEM TRFAVDVGIR
     GAMLRELRFK WAREKLDEVE FYRGLDDKRS DAEAAADPAP APVPRLTALP KRKGEVKFTM
     YGLDMSDPKW AEVAERVAEA EAHFVPEEAK AVEGRAKKAE ERLLLVDPRR GDPVPAIEEW
     KEDLRPKRVD WIALLERIKA RNVELYLKVA EILLDQESFE ANIRDYSKLI DLHAKANHVE
     SAERVLGKMK EKGIAPDVIT SIVLVHMYSK AGNLEQAKEA FEFIRREGFK PDLKLFSSMI
     NCYINHGEPE EAENLIKSMR GTRVIVKPTR EIYTDIVRAY AQRGMMTCAQ RVLNMMTHDE
     IKPTEELYAI CIEAYGRIGD PIQARAMFDQ IRRRLGHEPG DSSIAGVVAA HIEKNQLDEA
     LQWLLSLEKE GVELGVKTNL VLLDWLSMLQ LVLEAEQLVQ KIKKLGEEPI EVHVFLAGMY
     AKSRQEEKAR RSLKILEEKK KLLKSDQFER VIRGLLDGGF SEEANKYYKM MKSCGFEPSE
     TIEVGVKASL RIRGASRHIG RH
//
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