ID C5XXB5_SORBI Unreviewed; 682 AA.
AC C5XXB5;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 68.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0000259|Pfam:PF17177};
GN ORFNames=SORBI_3004G212100 {ECO:0000313|EMBL:EES05410.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES05410.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES05410.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000763; EES05410.1; -; Genomic_DNA.
DR RefSeq; XP_002452434.1; XM_002452389.1.
DR AlphaFoldDB; C5XXB5; -.
DR STRING; 4558.C5XXB5; -.
DR EnsemblPlants; EES05410; EES05410; SORBI_3004G212100.
DR GeneID; 8059671; -.
DR Gramene; EES05410; EES05410; SORBI_3004G212100.
DR KEGG; sbi:8059671; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_433038_0_0_1; -.
DR InParanoid; C5XXB5; -.
DR OMA; KRADWMA; -.
DR OrthoDB; 1114552at2759; -.
DR Proteomes; UP000000768; Chromosome 4.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR46862:SF2; OS02G0611400 PROTEIN; 1.
DR PANTHER; PTHR46862; OS07G0661900 PROTEIN; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13812; PPR_3; 1.
DR Pfam; PF17177; PPR_long; 1.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 342..376
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 377..411
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 396..516
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
FT REPEAT 412..446
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 449..483
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT COILED 568..626
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 682 AA; 77364 MW; 6689777E29B74FD1 CRC64;
MRALLSLSRL ARRVPASLAP VSAPTTFLLR HIHADVPPPP PPPPPHDSPL FVSRILESEP
SLTPNAESEP ASDPILDEFL ARFVAAFRPR LTAAFPNHDR DVLDEMLRLV ADAVLCRLTG
ADRGPDAIEL NDDLWAVVWE VSASVREAMR RDQVRADLRQ YLHCDEVKEM TRFAVDVGIR
GAMLRELRFK WAREKLDEVE FYRGLDDKRS DAEAAADPAP APVPRLTALP KRKGEVKFTM
YGLDMSDPKW AEVAERVAEA EAHFVPEEAK AVEGRAKKAE ERLLLVDPRR GDPVPAIEEW
KEDLRPKRVD WIALLERIKA RNVELYLKVA EILLDQESFE ANIRDYSKLI DLHAKANHVE
SAERVLGKMK EKGIAPDVIT SIVLVHMYSK AGNLEQAKEA FEFIRREGFK PDLKLFSSMI
NCYINHGEPE EAENLIKSMR GTRVIVKPTR EIYTDIVRAY AQRGMMTCAQ RVLNMMTHDE
IKPTEELYAI CIEAYGRIGD PIQARAMFDQ IRRRLGHEPG DSSIAGVVAA HIEKNQLDEA
LQWLLSLEKE GVELGVKTNL VLLDWLSMLQ LVLEAEQLVQ KIKKLGEEPI EVHVFLAGMY
AKSRQEEKAR RSLKILEEKK KLLKSDQFER VIRGLLDGGF SEEANKYYKM MKSCGFEPSE
TIEVGVKASL RIRGASRHIG RH
//