ID C5Y1P4_SORBI Unreviewed; 312 AA.
AC C5Y1P4;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 70.
DE RecName: Full=GH18 domain-containing protein {ECO:0000259|PROSITE:PS51910};
GN ORFNames=SORBI_3005G099000 {ECO:0000313|EMBL:EES08343.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES08343.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES08343.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000764; EES08343.1; -; Genomic_DNA.
DR RefSeq; XP_002449355.1; XM_002449310.1.
DR AlphaFoldDB; C5Y1P4; -.
DR STRING; 4558.C5Y1P4; -.
DR EnsemblPlants; EES08343; EES08343; SORBI_3005G099000.
DR GeneID; 8060060; -.
DR Gramene; EES08343; EES08343; SORBI_3005G099000.
DR KEGG; sbi:8060060; -.
DR eggNOG; KOG4701; Eukaryota.
DR HOGENOM; CLU_007818_0_0_1; -.
DR InParanoid; C5Y1P4; -.
DR OMA; WGIVEEW; -.
DR OrthoDB; 402651at2759; -.
DR Proteomes; UP000000768; Chromosome 5.
DR GO; GO:0005576; C:extracellular region; IBA:GO_Central.
DR GO; GO:0004568; F:chitinase activity; IBA:GO_Central.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd02877; GH18_hevamine_XipI_class_III; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR InterPro; IPR045321; Cts1-like.
DR InterPro; IPR001223; Glyco_hydro18_cat.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR PANTHER; PTHR45708; ENDOCHITINASE; 1.
DR PANTHER; PTHR45708:SF4; XYLANASE INHIBITOR PROTEIN 1; 1.
DR Pfam; PF00704; Glyco_hydro_18; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR PROSITE; PS51910; GH18_2; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..32
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 33..312
FT /note="GH18 domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002959740"
FT DOMAIN 36..312
FT /note="GH18"
FT /evidence="ECO:0000259|PROSITE:PS51910"
SQ SEQUENCE 312 AA; 34383 MW; F96D4F9EC627D5E5 CRC64;
MASRRRHSCL GAPLVLALAF VLLSCLAGPA TAKQTNQVTV FWGRNKDEGS LREACDTGLY
TTVIISFYSV FGHGRYWGDL SGHQLGGVGA DIKHCQQSKG ILVLLSIGGG GHDYSLPSSQ
SAADVADNLW NAHLGGRRRG VYRPFGDAAV DGIDFYIDNG APDHYDELAR RLDGYNRFYR
GRKGVRLTAS PRCGCPDWRV DRALQTGLFE RIHVRFYGDD KCSYKNGGTW GIVEEWDKWT
ARYPKAEVYL GLAAAESGVP DGAQGTIAVY LKYLYYDLLP KVQKAPNYGG VMVWDRYSDK
KTGYSGVVQG WA
//
