ID C5Y7W0_SORBI Unreviewed; 380 AA.
AC C5Y7W0;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 72.
DE RecName: Full=BTB domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3005G212300 {ECO:0000313|EMBL:EES08963.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES08963.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES08963.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000764; EES08963.1; -; Genomic_DNA.
DR RefSeq; XP_002449975.1; XM_002449930.1.
DR AlphaFoldDB; C5Y7W0; -.
DR EnsemblPlants; EES08963; EES08963; SORBI_3005G212300.
DR GeneID; 8082093; -.
DR Gramene; EES08963; EES08963; SORBI_3005G212300.
DR KEGG; sbi:8082093; -.
DR eggNOG; KOG1987; Eukaryota.
DR HOGENOM; CLU_004253_2_0_1; -.
DR InParanoid; C5Y7W0; -.
DR OMA; NGSHAWG; -.
DR OrthoDB; 383833at2759; -.
DR Proteomes; UP000000768; Chromosome 5.
DR GO; GO:0016567; P:protein ubiquitination; IEA:InterPro.
DR GO; GO:0009628; P:response to abiotic stimulus; IEA:UniProt.
DR CDD; cd18280; BTB_POZ_BPM_plant; 1.
DR CDD; cd00121; MATH; 1.
DR Gene3D; 1.25.40.420; -; 1.
DR InterPro; IPR045005; BPM1-6.
DR InterPro; IPR000210; BTB/POZ_dom.
DR InterPro; IPR002083; MATH/TRAF_dom.
DR InterPro; IPR011333; SKP1/BTB/POZ_sf.
DR InterPro; IPR008974; TRAF-like.
DR PANTHER; PTHR26379; BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1; 1.
DR PANTHER; PTHR26379:SF428; OS08G0228200 PROTEIN; 1.
DR Pfam; PF00651; BTB; 1.
DR SMART; SM00225; BTB; 1.
DR SUPFAM; SSF54695; POZ domain; 1.
DR SUPFAM; SSF49599; TRAF domain-like; 1.
DR PROSITE; PS50097; BTB; 1.
DR PROSITE; PS50144; MATH; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 23..161
FT /note="MATH"
FT /evidence="ECO:0000259|PROSITE:PS50144"
FT DOMAIN 205..275
FT /note="BTB"
FT /evidence="ECO:0000259|PROSITE:PS50097"
SQ SEQUENCE 380 AA; 42167 MW; 5C2AEB2435E80C6F CRC64;
MAASMVPAET RKITWRCSPD VDRCSHMFEI HGYTLQAEGL GVGKTVVRSA TFAVGGYDWS
ISYYPDGYYG QESSGYASVY IDFMSNKTCP AGTKVSGHFR FRLFNPATGE FRIMLGGYLP
FKHTVNPNGS HAWGSAKFID RRWLQTSPYL CHDRLTIVCD LSVLVGSRVS GPESTETCEN
EIIIEVPPSN LSENLEKLLD MKEGADVTFK VKGVVFHAHK VVLAARSPVF KAELYGLIGE
RKTCRHGHIA IQDMEPGVFK ALLHFIYTDS LPAANGDCDL DDEGVVKHLL VAADRYAMDR
MRLMCESMLC KRLDVDNVAA ILALADQHYC CKLKDACVSF MSSPKRIKDV MATQGYDHLK
KACPSIVMNL LEESVKSSVC
//
