ID C5YJ88_SORBI Unreviewed; 465 AA.
AC C5YJ88;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 08-NOV-2023, entry version 65.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3007G217600 {ECO:0000313|EMBL:EES15434.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES15434.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES15434.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000766; EES15434.1; -; Genomic_DNA.
DR RefSeq; XP_002445939.1; XM_002445894.1.
DR AlphaFoldDB; C5YJ88; -.
DR EnsemblPlants; EES15434; EES15434; SORBI_3007G217600.
DR GeneID; 8055213; -.
DR Gramene; EES15434; EES15434; SORBI_3007G217600.
DR KEGG; sbi:8055213; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_10_3_1; -.
DR InParanoid; C5YJ88; -.
DR OMA; AFCEMGI; -.
DR OrthoDB; 396831at2759; -.
DR Proteomes; UP000000768; Chromosome 7.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47936:SF4; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL; 1.
DR PANTHER; PTHR47936; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}; Signal {ECO:0000256|SAM:SignalP};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT SIGNAL 1..18
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 19..465
FT /note="Pentacotripeptide-repeat region of PRORP domain-
FT containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002958142"
FT REPEAT 237..271
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 272..306
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 342..376
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 377..411
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 60..105
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 465 AA; 52392 MW; 68AFA93D1EDFDE1A CRC64;
MLSLGALHKL CAAFDAVALT VIAAGLSRPP SGRHPFSSAH AHSPHPVDFP TIAACRAAVS
ASKGDRRRRR RPGGGQPSPS SSPAAAAAEE KAEEEQQQQQ PVLVKIKHER DPERLYQLFR
TNAHNRLLVE NRFAFEDAVA RLAGARRNDL VEEILEQHKA LPQGRREGFV VRIIGLYGKA
GMPSHALRTF QEMGMYGCPR TAKSLNATMK VLLRAQMFDE ALWLFEEGPE KYGVELDDIS
CNTVVKIYCD MGDLRAAYRV MQGMEGAGVQ PDVVTYTTLM AAFYKCGQRE VGDGLWNLMR
LRGCEPTLAT YNVRIQFLIN RERGWQANEL VRKMYAVGIK PDEITYNLII KGFFMMGEHE
MAKTVFGAMH GRGCKPNSKV YQTMVHYLCE RRDFDLAFRF CKDSMEKNWF PSVNTINQLL
KGLMAISKDR NAREIMKLVT GRKPPYSDGE MKVFKDILSH RKTGR
//