ID C5YK11_SORBI Unreviewed; 520 AA.
AC C5YK11;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 71.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3007G100500 {ECO:0000313|EMBL:EES13662.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES13662.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES13662.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000766; EES13662.1; -; Genomic_DNA.
DR RefSeq; XP_002444167.1; XM_002444122.1.
DR AlphaFoldDB; C5YK11; -.
DR EnsemblPlants; EES13662; EES13662; SORBI_3007G100500.
DR GeneID; 8067984; -.
DR Gramene; EES13662; EES13662; SORBI_3007G100500.
DR KEGG; sbi:8067984; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_20_1; -.
DR InParanoid; C5YK11; -.
DR OMA; YNSMIVP; -.
DR OrthoDB; 899195at2759; -.
DR Proteomes; UP000000768; Chromosome 7.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47939:SF5; BNAC02G25990D PROTEIN; 1.
DR PANTHER; PTHR47939; MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 5.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 238..273
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 274..308
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 309..343
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 344..378
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 445..479
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 520 AA; 58545 MW; 26241EAFBF02638C CRC64;
MAPPLAAVLR PHLSRLGQTL LSRFLRLSTS HCPSDQSDFE PDPDHPIPSA LDNDDGELVC
FLHRLSSAAS STSSPKEALS LLLSLSPGPS PASPALLVRA LWELRRDPDT AALALRYGDE
CSAVDGADGA GLPPPADAWH LAVWAAGKAR RFDLAWAVVR RMRNRGVLTG RAMVILMERY
AAANEVNKAV KTFDVMEKFK VESDQSVFYS LLRALCKSKN IEDAEELLLL RKKFFPLSAE
GFNIILDGWC NVITDLAEAK RVWREMSNHC ITPDGMSYTL MISCFSKVGS LFDTLRVYDE
MKKRGWIPGI GVYNSLVYVL TRENCVKDAH NIFSKLTDEG LQPDVETYNS MIVPLCESCK
LDEARVVMES MILKGIVPTI STYHAFLKQE GIDESLKLLQ KMKEDGCGPK SDTFLMLFDK
FFLLNESGNA LRVWNEMRKY KISPVRSHYM TVVEGLVKHG CIPRALEYYD EMKEKGFASD
TQLDKEFKTF LLNNRDHWRG AGKYNIIPQR GKHFAKRSRM
//