ID C5YM00_SORBI Unreviewed; 871 AA.
AC C5YM00;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 71.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=SORBI_3007G015300 {ECO:0000313|EMBL:EES13250.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES13250.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES13250.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM000766; EES13250.1; -; Genomic_DNA.
DR RefSeq; XP_002443755.1; XM_002443710.1.
DR AlphaFoldDB; C5YM00; -.
DR EnsemblPlants; EES13250; EES13250; SORBI_3007G015300.
DR GeneID; 8066088; -.
DR Gramene; EES13250; EES13250; SORBI_3007G015300.
DR KEGG; sbi:8066088; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR InParanoid; C5YM00; -.
DR OMA; RCLHHFK; -.
DR OrthoDB; 982363at2759; -.
DR Proteomes; UP000000768; Chromosome 7.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 8.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 126..160
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 231..265
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 266..300
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 301..335
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 402..436
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 437..471
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 472..506
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 573..607
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 793..871
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
FT REGION 51..91
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 63..82
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 871 AA; 96853 MW; 08D98221A5064297 CRC64;
MELLPAPFPT FLPRPHQLLP QLPLSRPCHG RLQEPIMAAF AQAPPLALPF QEATRSSSSQ
PPRPSNRPSP PAQRPTTAHL PPPGPFHSSA SSEPLIVTET KLITMHSCAG RLGDARKVFE
GMACRDLLAW SAMIGAYAIR GLYKDVVSLA VTMVREGVTP DRFLITRILQ ACAYTEDLEL
GVAMHSLAIR SGFMAETARD VPVGNSVLAM YVKCRELGRA RVVFEKMGQR DLGTWNSMIF
GCCQSNEWEE ARMLLDDMRR EGTLPGVVTW NTLISSYARS GELDVAMEML EQMEESGVAP
DVVTWTSLVS GFVHSDRSGE ALRCFMRMRL AGVEPNGMTI ASAISACASL RLLSQGMELH
CHAIKVGSVN NVLSGNSLVD MYAKCGEIVA AKRIFNEIPE KDIFSWNSMV AGYAQAGYCG
KAYELFCKME SLGVRRNVIT WNIMISGYIR NGDDERAFEL FQMMESYGVK RDTASWNALI
AGSVHNGHSD RALRIFRQMQ SLLVRPDYIT ILSIIPAFAN LVAFSKVREI HACIFHNNLE
MDGKIANALI NAYSKSGDLA GACAVFDRHS SRNIISWNCI ILAHLLHGSP CEALDRFCEM
KQEGVRPDHT TLTAVIKAYG LQGKVSEAKQ IFYNMTHDYN IHPDLDHYAA IVDLLGRSGS
LQEAYEFIDN MPLIPNLAVW EALLTAASIH GNARLANLAA RELSLLDPSD PRIQRLVFNY
WDLTGKSADV PLMTVYNKGR ELEDVDSCSV EIKNKVYLFS TSDNLALENT IAELKLIMIQ
IRMSLLCNGT DAEEEKEELS GIHCEKLAIA FAVSNSPPFR NIRIIKTLRM CSLCHVFAKL
VSEKYERQIL IKDSNCLHKF KNGKCSCEDY W
//