ID C5Z0A0_SORBI Unreviewed; 1243 AA.
AC C5Z0A0;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 2.
DT 24-JAN-2024, entry version 72.
DE RecName: Full=Structural maintenance of chromosomes protein {ECO:0000256|PIRNR:PIRNR005719};
GN ORFNames=SORBI_3009G184200 {ECO:0000313|EMBL:EES18430.2};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES18430.2, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES18430.2, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PIRNR:PIRNR005719}.
CC -!- SIMILARITY: Belongs to the SMC family. SMC4 subfamily.
CC {ECO:0000256|ARBA:ARBA00006005}.
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DR EMBL; CM000768; EES18430.2; -; Genomic_DNA.
DR AlphaFoldDB; C5Z0A0; -.
DR STRING; 4558.C5Z0A0; -.
DR EnsemblPlants; EES18430; EES18430; SORBI_3009G184200.
DR Gramene; EES18430; EES18430; SORBI_3009G184200.
DR eggNOG; KOG0996; Eukaryota.
DR HOGENOM; CLU_025359_1_1_1; -.
DR InParanoid; C5Z0A0; -.
DR OrthoDB; 231904at2759; -.
DR Proteomes; UP000000768; Chromosome 9.
DR ExpressionAtlas; C5Z0A0; baseline and differential.
DR GO; GO:0005694; C:chromosome; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0051321; P:meiotic cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0007076; P:mitotic chromosome condensation; IBA:GO_Central.
DR Gene3D; 1.10.287.1490; -; 2.
DR Gene3D; 1.20.1060.20; -; 1.
DR Gene3D; 3.30.70.1620; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003395; RecF/RecN/SMC_N.
DR InterPro; IPR024704; SMC.
DR InterPro; IPR010935; SMC_hinge.
DR InterPro; IPR036277; SMC_hinge_sf.
DR PANTHER; PTHR18937:SF172; STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN; 1.
DR PANTHER; PTHR18937; STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; 1.
DR Pfam; PF06470; SMC_hinge; 1.
DR Pfam; PF02463; SMC_N; 1.
DR PIRSF; PIRSF005719; SMC; 1.
DR SMART; SM00968; SMC_hinge; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF75553; Smc hinge domain; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Meiosis {ECO:0000256|ARBA:ARBA00023254};
KW Nucleus {ECO:0000256|PIRNR:PIRNR005719};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 554..672
FT /note="SMC hinge"
FT /evidence="ECO:0000259|SMART:SM00968"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 201..414
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 440..512
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 714..776
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 815..990
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1243 AA; 142307 MW; C1AC9837F4280AB3 CRC64;
MAMEISPTQS PPRTPRRAAK PRLFIKEMVL RNFKSYAGEQ RIGPFHKSFS AVVGPNGSGK
SNVIDAMLFV FGKRAKQMRL NKVSELIHNS SNHQNLDSAG VSVHFQEIID MDDGNYNAVE
GSDFVISRVA FRDNTSKYYI NERGSNFTEV TKLLKGKGVD LDNNRFLILQ GEVEQISLMK
PKSQGPHDEG FLEYLEDIIG TNQYVEKIEE AYKQLEVLNE KRTASVQMLK LAEKERDSLE
SAKNEAETYM LKELSLLKWQ EKATKLASDD AISHVNQCQE NVADLEKNLA SEREKIQQNS
QTLKEMESIY NRHVKRQEDL ENNMKSCKDQ FKEFERKDVK YREDLKHLKQ NIKKLDDKAE
KDTSKCDEKT KEIEESSNLI PQLEAEIPKL QERLNEEEKV LEQIKASSRE QTERLRAELT
QVRIELEPWE NQIIEHKGRL DVASAEKKLM KQKQDAAQAE LTDAQNQMES IKEKVETKDS
YIVELQEKIE KHQNEASEAR KIEQECQKQE DSLIPREQAA RQTVAEMKTT RDSEKNQSTA
LKAILQAKES NEIQGIYGRL GDLGAIDAKY DVAISTAASS GLNYIVVETI NSAQACIELL
RRRNRDETVT CLILEKQTHL LHKIKEKVKT PEGVPRLFDL VKVKDEKLKL AFFHVLGNTV
VANDLDQASR IAYTAAKEFR RVVTLGGELF EKSGTMSGGG KRVQRGMMGT AIRESFSEEA
IKKAENELTK LVDELNELRE KMNDAKKHYR SMEDAKSRLE MELAKAKKEV ESMNAQYIYN
EKRLESLKAA SQPKADELRR MKELDGIISS EQAELDRLTK CSSKLKDQAL ELQQKIENAG
GKMLKDQKAK VGNIQSELDK TSSEINRHKV NITSGEKLVK RLTKGIEESK KDREKLSAEK
ENMMSIFKEI EKKAFVVQEE YKKTQEMIDN HKVELDKTKE EYTKLKKAMD ELRASEVDAE
YKLQDTKKLA KEWEMKVKTF KKRVDEIQTN VVKHMDQIQK DAVDPEKLKV TLGDEQLNDT
CDMKRAMEMV ALLEAQIKDL SPNLDSIAEY RTKARLYGDR VDELNATTQE RDDLKKLYDG
LRKRRLDEFM AGFNIISLKL KEMYQMITLG GDAELELVDS LDPFSEGVVF SVRPPKKSWK
NIANLSGGEK TLSSLALVFA LHHYKPTPLY VMDEIDAALD FKNVSIVGHY VKDRTKDAQF
IIISLRNNMF ELADRLVGIY KTDNCTKSIT INPGSFAESM KVV
//
