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Database: UniProt
Entry: C5Z3V7_SORBI
LinkDB: C5Z3V7_SORBI
Original site: C5Z3V7_SORBI 
ID   C5Z3V7_SORBI            Unreviewed;       346 AA.
AC   C5Z3V7;
DT   01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   01-SEP-2009, sequence version 1.
DT   24-JAN-2024, entry version 64.
DE   RecName: Full=BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172};
GN   ORFNames=SORBI_3010G033600 {ECO:0000313|EMBL:EER87829.1};
OS   Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX   NCBI_TaxID=4558 {ECO:0000313|EMBL:EER87829.1, ECO:0000313|Proteomes:UP000000768};
RN   [1] {ECO:0000313|EMBL:EER87829.1, ECO:0000313|Proteomes:UP000000768}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX   PubMed=19189423; DOI=10.1038/nature07723;
RA   Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA   Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA   Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA   Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA   Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA   Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA   Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA   Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT   "The Sorghum bicolor genome and the diversification of grasses.";
RL   Nature 457:551-556(2009).
RN   [2] {ECO:0000313|Proteomes:UP000000768}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX   PubMed=29161754; DOI=10.1111/tpj.13781;
RA   McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA   Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA   Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT   "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT   a transcriptome atlas, and signatures of genome organization.";
RL   Plant J. 93:338-354(2018).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   EMBL; CM000769; EER87829.1; -; Genomic_DNA.
DR   RefSeq; XP_002436462.1; XM_002436417.1.
DR   AlphaFoldDB; C5Z3V7; -.
DR   STRING; 4558.C5Z3V7; -.
DR   EnsemblPlants; EER87829; EER87829; SORBI_3010G033600.
DR   GeneID; 8070726; -.
DR   Gramene; EER87829; EER87829; SORBI_3010G033600.
DR   KEGG; sbi:8070726; -.
DR   eggNOG; KOG3226; Eukaryota.
DR   HOGENOM; CLU_057218_0_0_1; -.
DR   InParanoid; C5Z3V7; -.
DR   OMA; PSWMGSK; -.
DR   OrthoDB; 1334125at2759; -.
DR   Proteomes; UP000000768; Chromosome 10.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR   GO; GO:0010385; F:double-stranded methylated DNA binding; IEA:EnsemblPlants.
DR   GO; GO:0006284; P:base-excision repair; IEA:InterPro.
DR   GO; GO:0080111; P:DNA demethylation; IEA:EnsemblPlants.
DR   GO; GO:0006266; P:DNA ligation; IEA:EnsemblPlants.
DR   GO; GO:0006303; P:double-strand break repair via nonhomologous end joining; IEA:EnsemblPlants.
DR   GO; GO:0000012; P:single strand break repair; IEA:InterPro.
DR   CDD; cd17725; BRCT_XRCC1_rpt1; 1.
DR   Gene3D; 3.40.50.10190; BRCT domain; 1.
DR   InterPro; IPR001357; BRCT_dom.
DR   InterPro; IPR036420; BRCT_dom_sf.
DR   InterPro; IPR045080; BRCT_XRCC1_rpt1.
DR   PANTHER; PTHR11370:SF5; DNA REPAIR PROTEIN XRCC1; 1.
DR   PANTHER; PTHR11370; DNA-REPAIR PROTEIN XRCC1; 1.
DR   Pfam; PF00533; BRCT; 1.
DR   SMART; SM00292; BRCT; 1.
DR   SUPFAM; SSF52113; BRCT domain; 1.
DR   PROSITE; PS50172; BRCT; 1.
PE   4: Predicted;
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   DOMAIN          39..127
FT                   /note="BRCT"
FT                   /evidence="ECO:0000259|PROSITE:PS50172"
FT   REGION          1..37
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          133..175
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          295..322
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        133..155
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        159..175
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   346 AA;  38773 MW;  C1BFB818BC078C6F CRC64;
     MSGSKRSLPS WMGSSKDGED DSCKKKHAGT SQKAQKGPDF SKLLDGVVFV LSGFVNPERS
     TLRSQALDMG AEYRADWTSD CTLLVCAFVN TPKFRQVQAD NGTIISKDWI FESYKQKKLV
     DIEPFLMHAG KPWRKNKEPV ETDQDEKETR KVHQKQVQRS RVKPSTSDAT EAGNLESANK
     CFSPSKIKQW AVDDLAQTMS WLDSQEEKPE PSELKTIASE GIITCLQDAI ESLEQGNDIK
     GVAEQWSFVP HVVNELLKLD GGGKGAALPK EQLCQLAAKC KKIYQAEFAR VDMDGKNKDK
     HQNDSHVAEH RRKTKSDDDH YDSDETIEMT EEEIDFACRQ LPGLCG
//
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