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Database: UniProt
Entry: C5Z8C2_SORBI
LinkDB: C5Z8C2_SORBI
Original site: C5Z8C2_SORBI 
ID   C5Z8C2_SORBI            Unreviewed;       310 AA.
AC   C5Z8C2;
DT   01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   01-SEP-2009, sequence version 1.
DT   24-JAN-2024, entry version 61.
DE   RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN   ORFNames=SORBI_3010G237900 {ECO:0000313|EMBL:EER88849.1};
OS   Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX   NCBI_TaxID=4558 {ECO:0000313|EMBL:EER88849.1, ECO:0000313|Proteomes:UP000000768};
RN   [1] {ECO:0000313|EMBL:EER88849.1, ECO:0000313|Proteomes:UP000000768}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX   PubMed=19189423; DOI=10.1038/nature07723;
RA   Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA   Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA   Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA   Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA   Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA   Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA   Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA   Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT   "The Sorghum bicolor genome and the diversification of grasses.";
RL   Nature 457:551-556(2009).
RN   [2] {ECO:0000313|Proteomes:UP000000768}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX   PubMed=29161754; DOI=10.1111/tpj.13781;
RA   McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA   Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA   Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT   "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT   a transcriptome atlas, and signatures of genome organization.";
RL   Plant J. 93:338-354(2018).
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DR   EMBL; CM000769; EER88849.1; -; Genomic_DNA.
DR   RefSeq; XP_002437482.1; XM_002437437.1.
DR   AlphaFoldDB; C5Z8C2; -.
DR   EnsemblPlants; EER88849; EER88849; SORBI_3010G237900.
DR   GeneID; 8063776; -.
DR   Gramene; EER88849; EER88849; SORBI_3010G237900.
DR   KEGG; sbi:8063776; -.
DR   eggNOG; KOG0118; Eukaryota.
DR   eggNOG; KOG1457; Eukaryota.
DR   HOGENOM; CLU_071422_1_0_1; -.
DR   InParanoid; C5Z8C2; -.
DR   OMA; CVAFVEY; -.
DR   OrthoDB; 2729750at2759; -.
DR   Proteomes; UP000000768; Chromosome 10.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   Gene3D; 3.30.70.330; -; 2.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   PANTHER; PTHR10501:SF41; PROTEIN COUCH POTATO; 1.
DR   PANTHER; PTHR10501; U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B; 1.
DR   Pfam; PF00076; RRM_1; 2.
DR   SMART; SM00360; RRM; 2.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   PROSITE; PS50102; RRM; 2.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW   ProRule:PRU00176}.
FT   DOMAIN          62..140
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          222..299
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   REGION          1..27
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          142..170
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        142..166
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   310 AA;  33550 MW;  78C7A1A5D910E511 CRC64;
     MAASYFNHSS SSYPPPPPPP GTSPYGAYRH AYPPAPAPAP PAFYGAYYDR AEQALPARDE
     LRTLFIAGLP ADAKPREVYN LFRDFPGYVS SHLRTGKSSQ AYAFAVFADQ QSALTALSGT
     NGMVFDLEKN CSLHVDLAKS NSRSKRLRSD DTSPYSPEKR TRKPRGFPDS GAGSNIYISG
     MGSSSHSLSG YPSAQSYTSL ESSASLSKDP STFAPQINPP CPTLFVANLG PACSEQELID
     VFSSCAGFVK LKMQNKLGAP VAFVDFKDSI SSTEAINRLQ GVILYSSLGE GMRLEYAKSR
     MGLWKRDKHP
//
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