ID C6T559_SOYBN Unreviewed; 226 AA.
AC C6T559;
DT 22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 22-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 75.
DE RecName: Full=Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein {ECO:0000259|Pfam:PF03168};
GN Name=100527705 {ECO:0000313|EnsemblPlants:KRH41251};
GN ORFNames=GLYMA_08G019000 {ECO:0000313|EMBL:KRH41251.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:ACU16851.1};
RN [1] {ECO:0000313|EMBL:ACU16851.1}
RP NUCLEOTIDE SEQUENCE.
RA Cheung F., Xiao Y., Chan A., Moskal W., Town C.D.;
RL Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KRH41251.1, ECO:0000313|EnsemblPlants:KRH41251}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH41251};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH41251.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [3] {ECO:0000313|EnsemblPlants:KRH41251}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH41251};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KRH41251.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH41251.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; BT092571; ACU16851.1; -; mRNA.
DR EMBL; CM000841; KRH41251.1; -; Genomic_DNA.
DR RefSeq; NP_001236235.1; NM_001249306.1.
DR AlphaFoldDB; C6T559; -.
DR PaxDb; 3847-GLYMA08G02220-1; -.
DR EnsemblPlants; KRH41251; KRH41251; GLYMA_08G019000.
DR GeneID; 100527705; -.
DR Gramene; KRH41251; KRH41251; GLYMA_08G019000.
DR KEGG; gmx:100527705; -.
DR eggNOG; ENOG502RY6E; Eukaryota.
DR HOGENOM; CLU_050605_3_0_1; -.
DR InParanoid; C6T559; -.
DR OMA; DCNRTRN; -.
DR OrthoDB; 777203at2759; -.
DR Proteomes; UP000008827; Chromosome 8.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.1820; -; 1.
DR InterPro; IPR004864; LEA_2.
DR PANTHER; PTHR31234; LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY; 1.
DR PANTHER; PTHR31234:SF43; LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY; 1.
DR Pfam; PF03168; LEA_2; 1.
DR SUPFAM; SSF117070; LEA14-like; 1.
PE 2: Evidence at transcript level;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 45..71
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 105..204
FT /note="Late embryogenesis abundant protein LEA-2 subgroup"
FT /evidence="ECO:0000259|Pfam:PF03168"
SQ SEQUENCE 226 AA; 24717 MW; B3779CA38EDD5CCE CRC64;
MAQSPDQQMK PLAPFVSSTS HFSRQEDHDQ FQDTSEQKII RIRKFVLCCG CFTALVVILV
VVLIVLGFTV YNVKEPEVSM NSVTLVSGTF ANSGATNNVT LLADISVKNT NAFTLRFGKT
TTIVYYGGMG IGEGTSPPGK AKARRTIRVN STLEIMAKKL LDIPTLNIDL RDQSLNISSY
TRIDGKVKIL NMFPRKVVVE LNCTIGYNIT TGLVTNGDNC LGTVDI
//
