ID C6WAU1_ACTMD Unreviewed; 1306 AA.
AC C6WAU1;
DT 22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 22-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 79.
DE SubName: Full=ATP-dependent helicase HrpA {ECO:0000313|EMBL:ACU37410.1};
GN OrderedLocusNames=Amir_3518 {ECO:0000313|EMBL:ACU37410.1};
OS Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / JCM 3225 / NBRC 14064
OS / NCIMB 13271 / NRRL B-12336 / IMRU 3971 / 101).
OC Bacteria; Actinomycetota; Actinomycetes; Pseudonocardiales;
OC Pseudonocardiaceae; Actinosynnema.
OX NCBI_TaxID=446462 {ECO:0000313|EMBL:ACU37410.1, ECO:0000313|Proteomes:UP000002213};
RN [1] {ECO:0000313|EMBL:ACU37410.1, ECO:0000313|Proteomes:UP000002213}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29888 / DSM 43827 / JCM 3225 / NBRC 14064 / NCIMB 13271 /
RC NRRL B-12336 / IMRU 3971 / 101 {ECO:0000313|Proteomes:UP000002213};
RX PubMed=21304636; DOI=10.4056/sigs.21137;
RA Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Del Rio T.G.,
RA Nolan M., Lucas S., Tice H., Cheng J.F., Chertkov O., Bruce D., Goodwin L.,
RA Pitluck S., Rohde M., Goker M., Pati A., Ivanova N., Mavromatis K.,
RA Chen A., Palaniappan K., Hauser L., Chang Y.J., Jeffries C.C., Brettin T.,
RA Detter J.C., Han C., Chain P., Tindall B.J., Bristow J., Eisen J.A.,
RA Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT "Complete genome sequence of Actinosynnema mirum type strain (101).";
RL Stand. Genomic Sci. 1:46-53(2009).
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DR EMBL; CP001630; ACU37410.1; -; Genomic_DNA.
DR RefSeq; WP_015802298.1; NC_013093.1.
DR STRING; 446462.Amir_3518; -.
DR KEGG; ami:Amir_3518; -.
DR eggNOG; COG1643; Bacteria.
DR HOGENOM; CLU_001832_3_3_11; -.
DR OMA; YERVTLY; -.
DR OrthoDB; 9805617at2; -.
DR Proteomes; UP000002213; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd17989; DEXHc_HrpA; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR024590; HrpA_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR010222; RNA_helicase_HrpA.
DR NCBIfam; TIGR01967; DEAH_box_HrpA; 1.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF118; ATP-DEPENDENT RNA HELICASE DHX33; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF11898; DUF3418; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:ACU37410.1};
KW Hydrolase {ECO:0000313|EMBL:ACU37410.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000002213}.
FT DOMAIN 84..247
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 277..444
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 1306 AA; 145561 MW; 4223C1C7E3248C7B CRC64;
MNTPSFADLQ QRLPQLMTRD QRRLRRRLDG VRKMRDERAR AGVAAEIAAE FDQAELRVAL
RREALPTITY PAELPVSAHK DEIAALIRDH QVVVVAGETG SGKTTQLPKI CLELGRGVLG
QIGHTQPRRL AARTVAERVA EELGTELGAA VGYKVRFTDQ SGDDTLVKLM TDGILLAELQ
TDRMLSRYDT IIIDEAHERS LNVDFLLGYL KQLLPQRPDL KVVITSATID PQRFSRHFSD
APVIEVSGRT YPVEVRYRPL VDPEDPEADP DRDQTRGICD AVRELQAEGP GDVLVFLSGE
REIRDTADAL NALKLRDTEV LPLFARLSFA EQHRVFQPHR GRRVVLATNV AETSLTVPGI
KYVIDPGTAR VSRYSHRLKV QRLPIEPVSQ ASANQRKGRC GRVSEGICVR LYSEDDFLAR
PEFTDPEILR TNLASVILQM TSIGLGDIAG FPFIDPPESR NIADGVQLLQ ELGALAPTPG
RELTPLGRKL AQLPIDPRLA RMVVEADRNG CVREVMVIAA ALSIQDPRER PADKQQAADE
QHARFKDAGS DFTSYLTLWE YLKEQQKERS SNQFRRMCRA EFLNYLRVRE WQDVYAQLRQ
VAKTLGVHVN TEPGESRNIH VSLLAGLLSH IGLKDVPKRE QGKKEQGRRQ LAEFLGARGA
RFAVFPGSAL SKQPPQWVMA AELVETSRLW GRTVAKIEPE WAERLAEHLV KRTYSEPRWD
AKRGAVVASE KVTLYGVPIV AARRVNYGRI DPELSRELFI RHALVQGEWS THHAFYARNQ
ELLAEVAELE NRARRRDIVV DEETIFDFYA ERVPADVVSA RHFDSWWKKA RHEDAELLTF
SKKMLVNDVA KVEPEAYPDQ MDRGGLTFSL SYRFEPGVGG DGVTVRLPLP ALTKVPDDAL
SWQIPGLRTE LVVALIRSLP KPVRRNFVPV PDVAAAALSR IKVDEALLPA LERELRALTG
VVVPREEWNL DQVPDHLRLT FQVVGEAGEE LAVGKDPAAL KLRLKQRLRA SLAEAAGSLA
RTGVVRWDFG DLPRAVRRER SGIVVTAYPA LVDKGTSAAV EILDTPGRQA HAMRLGTRRL
ITLNVPSPVK LLQRGLTNSE KLTLTRNPHG GVAPLLADCI AAAVDKLVAD AGGPVWKQDA
FAALTEKVRV GLGEAVFEVV GRVRKVLDAA QEVELAIGAV RGPGVEESLA DARAQLSGLV
HAGFVAEAGA ARLDDVVRYL KGIAVRVEKL GRDVRRDQEW MDRVHAVHAE YRDLRAKLPA
DEPQPGLDEV RWMIEELRVS YFAQTIGARY TVSDKRIFKA LDAVPR
//