ID C6XVB5_PEDHD Unreviewed; 293 AA.
AC C6XVB5;
DT 22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 22-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 79.
DE SubName: Full=Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ACU03981.1};
GN OrderedLocusNames=Phep_1772 {ECO:0000313|EMBL:ACU03981.1};
OS Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457
OS / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3).
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pedobacter.
OX NCBI_TaxID=485917 {ECO:0000313|EMBL:ACU03981.1, ECO:0000313|Proteomes:UP000000852};
RN [1] {ECO:0000313|EMBL:ACU03981.1, ECO:0000313|Proteomes:UP000000852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 /
RC NCIMB 9290 / NRRL B-14731 / HIM 762-3
RC {ECO:0000313|Proteomes:UP000000852};
RX PubMed=21304637; DOI=10.4056/sigs.22138;
RA Han C., Spring S., Lapidus A., Del Rio T.G., Tice H., Copeland A.,
RA Cheng J.F., Lucas S., Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S.,
RA Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K.,
RA Land M., Hauser L., Chang Y.J., Jeffries C.C., Saunders E., Chertkov O.,
RA Brettin T., Goker M., Rohde M., Bristow J., Eisen J.A., Markowitz V.,
RA Hugenholtz P., Kyrpides N.C., Klenk H.P., Detter J.C.;
RT "Complete genome sequence of Pedobacter heparinus type strain (HIM 762-
RT 3).";
RL Stand. Genomic Sci. 1:54-62(2009).
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DR EMBL; CP001681; ACU03981.1; -; Genomic_DNA.
DR AlphaFoldDB; C6XVB5; -.
DR STRING; 485917.Phep_1772; -.
DR KEGG; phe:Phep_1772; -.
DR eggNOG; COG4977; Bacteria.
DR HOGENOM; CLU_000445_59_0_10; -.
DR Proteomes; UP000000852; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 3.40.50.880; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002818; DJ-1/PfpI.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR PANTHER; PTHR43130; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43130:SF11; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF01965; DJ-1_PfpI; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF52317; Class I glutamine amidotransferase-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000852}.
FT DOMAIN 191..289
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 293 AA; 34016 MW; 5296B5D02D0770B6 CRC64;
MQQGKNADDF FKVQLVGFRK QIRLDGGSCI IEVDKTIAEV EYTDLIIVPA IWGDVMRGTQ
LNRHYFSWLI NQYKNGAEIA SYCVGAFIVA ATGLLNGKRC ATHWAYTNEL LAYYPEIKLV
PEKIITEQNG IYSSGGGTSY WNLLLYLLEK FTSRKVVIAA TKYFLLDLAR NSQSEFVMFK
GQKEHGDKLV EKVQLYIENN YQEKINIERL ATDFSVVRRT LERRFSKATK NTIAEYIQRT
KIEVAKKEIE KDRKTINEIM YELDYADKKA FKDLFLKITG LTPIEYKRKY VRN
//
