GenomeNet

Database: UniProt
Entry: C6YWG5_9GAMM
LinkDB: C6YWG5_9GAMM
Original site: C6YWG5_9GAMM 
ID   C6YWG5_9GAMM            Unreviewed;       464 AA.
AC   C6YWG5;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   24-JAN-2024, entry version 49.
DE   SubName: Full=FAD binding domain of DNA photolyase family protein {ECO:0000313|EMBL:AJI74680.1};
GN   ORFNames=BZ13_112 {ECO:0000313|EMBL:AJI74680.1};
OS   Francisella philomiragia subsp. philomiragia ATCC 25015.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales;
OC   Francisellaceae; Francisella.
OX   NCBI_TaxID=539329 {ECO:0000313|EMBL:AJI74680.1, ECO:0000313|Proteomes:UP000031897};
RN   [1] {ECO:0000313|EMBL:AJI74680.1, ECO:0000313|Proteomes:UP000031897}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=O#319L {ECO:0000313|EMBL:AJI74680.1,
RC   ECO:0000313|Proteomes:UP000031897};
RX   PubMed=25931589;
RA   Johnson S.L., Daligault H.E., Davenport K.W., Coyne S.R., Frey K.G.,
RA   Koroleva G.I., Broomall S.M., Bishop-Lilly K.A., Bruce D.C., Chertkov O.,
RA   Freitas T., Jaissle J., Ladner J.T., Rosenzweig C.N., Gibbons H.S.,
RA   Palacios G.F., Redden C.L., Xu Y., Minogue T.D., Chain P.S.;
RT   "Genome sequencing of 18 francisella strains to aid in assay development
RT   and testing.";
RL   Genome Announc. 3:0-0(2015).
CC   -!- COFACTOR:
CC       Name=(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate;
CC         Xref=ChEBI:CHEBI:15636; Evidence={ECO:0000256|ARBA:ARBA00001932};
CC   -!- COFACTOR:
CC       Name=FAD; Xref=ChEBI:CHEBI:57692;
CC         Evidence={ECO:0000256|PIRSR:PIRSR602081-1};
CC       Note=Binds 1 FAD per subunit. {ECO:0000256|PIRSR:PIRSR602081-1};
CC   -!- SIMILARITY: Belongs to the DNA photolyase class-1 family.
CC       {ECO:0000256|ARBA:ARBA00005862}.
CC   -!- SIMILARITY: Belongs to the DNA photolyase family.
CC       {ECO:0000256|RuleBase:RU004182}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP010019; AJI74680.1; -; Genomic_DNA.
DR   RefSeq; WP_004287886.1; NZ_DS999316.1.
DR   AlphaFoldDB; C6YWG5; -.
DR   KEGG; fpt:BZ13_112; -.
DR   PATRIC; fig|539329.6.peg.113; -.
DR   HOGENOM; CLU_010348_2_2_6; -.
DR   Proteomes; UP000031897; Chromosome.
DR   GO; GO:1901363; F:heterocyclic compound binding; IEA:UniProt.
DR   GO; GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
DR   GO; GO:0097159; F:organic cyclic compound binding; IEA:UniProt.
DR   GO; GO:0051716; P:cellular response to stimulus; IEA:UniProt.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:UniProt.
DR   GO; GO:0006950; P:response to stress; IEA:UniProt.
DR   Gene3D; 1.25.40.80; -; 1.
DR   Gene3D; 1.10.579.10; DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3; 1.
DR   Gene3D; 3.40.50.620; HUPs; 1.
DR   InterPro; IPR036134; Crypto/Photolyase_FAD-like_sf.
DR   InterPro; IPR036155; Crypto/Photolyase_N_sf.
DR   InterPro; IPR005101; Cryptochr/Photolyase_FAD-bd.
DR   InterPro; IPR002081; Cryptochrome/DNA_photolyase_1.
DR   InterPro; IPR018394; DNA_photolyase_1_CS_C.
DR   InterPro; IPR006050; DNA_photolyase_N.
DR   InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR   PANTHER; PTHR11455:SF9; (6-4)-PHOTOLYASE, ISOFORM A; 1.
DR   PANTHER; PTHR11455; CRYPTOCHROME; 1.
DR   Pfam; PF00875; DNA_photolyase; 1.
DR   Pfam; PF03441; FAD_binding_7; 1.
DR   PRINTS; PR00147; DNAPHOTLYASE.
DR   SUPFAM; SSF48173; Cryptochrome/photolyase FAD-binding domain; 1.
DR   SUPFAM; SSF52425; Cryptochrome/photolyase, N-terminal domain; 1.
DR   PROSITE; PS00394; DNA_PHOTOLYASES_1_1; 1.
DR   PROSITE; PS51645; PHR_CRY_ALPHA_BETA; 1.
PE   3: Inferred from homology;
KW   Chromophore {ECO:0000256|ARBA:ARBA00022991, ECO:0000256|RuleBase:RU004182};
KW   FAD {ECO:0000256|ARBA:ARBA00022827, ECO:0000256|PIRSR:PIRSR602081-1};
KW   Flavoprotein {ECO:0000256|ARBA:ARBA00022630, ECO:0000256|PIRSR:PIRSR602081-
KW   1}; Lyase {ECO:0000313|EMBL:AJI74680.1}.
FT   DOMAIN          4..125
FT                   /note="Photolyase/cryptochrome alpha/beta"
FT                   /evidence="ECO:0000259|PROSITE:PS51645"
FT   BINDING         217
FT                   /ligand="FAD"
FT                   /ligand_id="ChEBI:CHEBI:57692"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR602081-1"
FT   BINDING         229..233
FT                   /ligand="FAD"
FT                   /ligand_id="ChEBI:CHEBI:57692"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR602081-1"
FT   BINDING         263
FT                   /ligand="FAD"
FT                   /ligand_id="ChEBI:CHEBI:57692"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR602081-1"
FT   BINDING         363..365
FT                   /ligand="FAD"
FT                   /ligand_id="ChEBI:CHEBI:57692"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR602081-1"
FT   SITE            297
FT                   /note="Electron transfer via tryptophanyl radical"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR602081-2"
FT   SITE            350
FT                   /note="Electron transfer via tryptophanyl radical"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR602081-2"
FT   SITE            373
FT                   /note="Electron transfer via tryptophanyl radical"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR602081-2"
SQ   SEQUENCE   464 AA;  54623 MW;  0063BA83AA8F3235 CRC64;
     MPKKIAIHWF RQDLRLADNP ALHQASQADE TITIFILDEN QEIGGASKLW LHHSLSSLSK
     SLNNKLNFFS GNPLEIIKKL VKENNITDFY WNRCYDKYSI DRDTQIKQFL QEQDINVSSF
     NGSLLIEPWQ CKKDDGTHYK VYTPFYKELI KIRKYRSNIV KPSFNSLKKL ETADELDSLK
     LLEPKLSWQN IIDQWQIGED ASHQILEEFL DGKVKEYKIA RDFMSTDSTS KLSPYLHFGE
     ISPNQIFNAV QSLDYIGNNE EHFIKELVWR DFSYYQIYYY PELHNKNINQ KFDSFEWDND
     ATLLKRWQTG QTGIPIVDAG MRELWQTGYM HNRVRMIVAS FLIKNCLIHW KYGEKWFFDT
     LFDADFASNN ANWQWVAGCG LDAAPYFRIF NPVLQAEKFE AYEYIRKYVP ELKFLPNKLI
     AKPWEASELV LQEAGVKLGD NYPTPVIDLK KSRDKALELH KKLN
//
DBGET integrated database retrieval system