ID C7F1Z6_9HIV1 Unreviewed; 134 AA.
AC C7F1Z6;
DT 22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 22-SEP-2009, sequence version 1.
DT 08-NOV-2023, entry version 30.
DE RecName: Full=Env polyprotein {ECO:0000256|ARBA:ARBA00029888};
DE Flags: Fragment;
GN Name=env {ECO:0000313|EMBL:ACT86820.1};
OS Human immunodeficiency virus 1.
OC Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
OX NCBI_TaxID=11676 {ECO:0000313|EMBL:ACT86820.1};
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1] {ECO:0000313|EMBL:ACT86820.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=A01470A1 {ECO:0000313|EMBL:ACT86820.1};
RX PubMed=19644346; DOI=10.1097/QAD.0b013e32832faf61;
RA Gray R.R., Tatem A.J., Lamers S., Hou W., Laeyendecker O., Serwadda D.,
RA Sewankambo N., Gray R.H., Wawer M., Quinn T.C., Goodenow M.M., Salemi M.;
RT "Spatial phylodynamics of HIV-1 epidemic emergence in east Africa.";
RL AIDS 23:F9-F17(2009).
RN [2] {ECO:0000313|EMBL:ACT86820.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=A01470A1 {ECO:0000313|EMBL:ACT86820.1};
RX PubMed=19803713; DOI=10.1089/aid.2009.0127;
RA Collinson-Streng A., Redd A.D., Sewankambo N.K., Serwadda D., Rezapour M.,
RA Lamers S.L., Gray R.H., Wawer M.J., Quinn T.C., Laeyendecker O.;
RT "Geographic HIV type 1 subtype distribution in Rakai district, Uganda.";
RL AIDS Res. Hum. Retroviruses 25:1045-1048(2009).
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|ARBA:ARBA00004202};
CC Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004202}. Cell
CC membrane {ECO:0000256|ARBA:ARBA00004251}; Single-pass type I membrane
CC protein {ECO:0000256|ARBA:ARBA00004251}. Host cell membrane
CC {ECO:0000256|ARBA:ARBA00004505}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004505}. Host cell membrane
CC {ECO:0000256|ARBA:ARBA00004402}; Single-pass type I membrane protein
CC {ECO:0000256|ARBA:ARBA00004402}. Membrane
CC {ECO:0000256|ARBA:ARBA00004170}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004170}. Membrane
CC {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein
CC {ECO:0000256|ARBA:ARBA00004479}. Virion membrane
CC {ECO:0000256|ARBA:ARBA00004650}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004650}. Virion membrane
CC {ECO:0000256|ARBA:ARBA00004563}; Single-pass type I membrane protein
CC {ECO:0000256|ARBA:ARBA00004563}.
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DR EMBL; GQ333470; ACT86820.1; -; Genomic_DNA.
DR GO; GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0019031; C:viral envelope; IEA:UniProtKB-KW.
DR GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR CDD; cd09909; HIV-1-like_HR1-HR2; 1.
DR Gene3D; 1.10.287.210; -; 1.
DR Gene3D; 1.20.5.490; Single helix bin; 1.
DR InterPro; IPR000328; GP41-like.
DR Pfam; PF00517; GP41; 1.
DR SUPFAM; SSF58069; Virus ectodomain; 1.
PE 4: Predicted;
KW Cleavage on pair of basic residues {ECO:0000256|ARBA:ARBA00022685};
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Host cell membrane {ECO:0000256|ARBA:ARBA00022511};
KW Host membrane {ECO:0000256|ARBA:ARBA00022870};
KW Host-virus interaction {ECO:0000256|ARBA:ARBA00022581};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Viral envelope protein {ECO:0000313|EMBL:ACT86820.1};
KW Virion {ECO:0000256|ARBA:ARBA00022844}.
FT DOMAIN 3..134
FT /note="Retroviral envelope protein GP41-like"
FT /evidence="ECO:0000259|Pfam:PF00517"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ACT86820.1"
FT NON_TER 134
FT /evidence="ECO:0000313|EMBL:ACT86820.1"
SQ SEQUENCE 134 AA; 15929 MW; 807FB123DC389EDE CRC64;
MSGIVQQQNN FLRAIEAQQH LLQLTVWGIK QLQARVLAVE RYLKDQQLLG IWGCSGKHIC
TTTVPWNSSW SNKSIDEIWG NMTWMEWERE IDNYTGAIYS LIEESQIQQE KNEQELLQLD
KWASLWNWFD ITKW
//