GenomeNet

Database: UniProt
Entry: C7H088_9FIRM
LinkDB: C7H088_9FIRM
Original site: C7H088_9FIRM 
ID   C7H088_9FIRM            Unreviewed;       249 AA.
AC   C7H088;
DT   13-OCT-2009, integrated into UniProtKB/TrEMBL.
DT   13-OCT-2009, sequence version 1.
DT   24-JAN-2024, entry version 69.
DE   SubName: Full=RNA polymerase sigma-70 factor, sigma-B/F/G subfamily {ECO:0000313|EMBL:EEU03378.1};
GN   ORFNames=GCWU000322_00657 {ECO:0000313|EMBL:EEU03378.1};
OS   Eubacterium saphenum ATCC 49989.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales;
OC   Eubacteriales Family XIII. Incertae Sedis.
OX   NCBI_TaxID=592031 {ECO:0000313|EMBL:EEU03378.1, ECO:0000313|Proteomes:UP000018436};
RN   [1] {ECO:0000313|EMBL:EEU03378.1, ECO:0000313|Proteomes:UP000018436}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 49989 {ECO:0000313|EMBL:EEU03378.1,
RC   ECO:0000313|Proteomes:UP000018436};
RA   Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., Courtney L.,
RA   Fronick C., Harrison M., Strong C., Farmer C., Delahaunty K., Markovic C.,
RA   Hall O., Minx P., Tomlinson C., Mitreva M., Nelson J., Hou S., Wollam A.,
RA   Pepin K.H., Johnson M., Bhonagiri V., Nash W.E., Warren W., Chinwalla A.,
RA   Mardis E.R., Wilson R.K.;
RL   Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EEU03378.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; ACON01000003; EEU03378.1; -; Genomic_DNA.
DR   AlphaFoldDB; C7H088; -.
DR   STRING; 592031.GCWU000322_00657; -.
DR   eggNOG; COG1191; Bacteria.
DR   HOGENOM; CLU_014793_8_5_9; -.
DR   OrthoDB; 9809557at2; -.
DR   Proteomes; UP000018436; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   CDD; cd06171; Sigma70_r4; 1.
DR   Gene3D; 1.20.120.1810; -; 1.
DR   Gene3D; 1.20.140.160; -; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014322; RNA_pol_sigma-B/F/G.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   NCBIfam; TIGR02980; SigBFG; 1.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR30385:SF4; RNA POLYMERASE SIGMA FACTOR SIGO; 1.
DR   PANTHER; PTHR30385; SIGMA FACTOR F FLAGELLAR; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000018436};
KW   Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          210..232
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   249 AA;  28890 MW;  1FD30A5C2ED764B7 CRC64;
     MQDRERFEKY AKTRDINERN AIVEDYLYIV DILVRKYLNK GVEYDDLYQV GAMALIMAVE
     RFDASRGFEF SSFATPTILG EIKKYFRDKE WKLKVPRSVK EANAAIQSAR ESLFAKLQRD
     PTVKEIAEEK NMKEEEVAKL IDSSMAYNTL SLDVTFDDSG SDSGVSRYEK YMAVEGSGIE
     SLEYEEMIES ILSVLSEKNR YIFKKRFLEG KTQSEIAEKL GVSQMTISRA EKEIKEKFKE
     ELKRGEYIV
//
DBGET integrated database retrieval system