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Database: UniProt
Entry: C7J306_ORYSJ
LinkDB: C7J306_ORYSJ
Original site: C7J306_ORYSJ 
ID   C7J306_ORYSJ            Unreviewed;      1070 AA.
AC   C7J306;
DT   13-OCT-2009, integrated into UniProtKB/TrEMBL.
DT   13-OCT-2009, sequence version 1.
DT   24-JAN-2024, entry version 76.
DE   SubName: Full=Os05g0313900 protein {ECO:0000313|EMBL:BAH93069.1};
GN   OrderedLocusNames=Os05g0313900 {ECO:0000313|EMBL:BAH93069.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947 {ECO:0000313|EMBL:BAH93069.1, ECO:0000313|Proteomes:UP000000763};
RN   [1] {ECO:0000313|EMBL:BAH93069.1, ECO:0000313|Proteomes:UP000000763}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000000763};
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RA   Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N.,
RA   Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y.,
RA   Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N.,
RA   Fukunaka R., Hamada M., Harada C., Hayashi A., Hijishita S., Honda M.,
RA   Hosokawa S., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M.,
RA   Ito K., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K.,
RA   Karasawa W., Kurita K., Katagiri S., Kikuta A., Kobayashi H., Kobayashi N.,
RA   Machita K., Maehara T., Masukawa M., Mizubayashi T., Mukai Y., Nagasaki H.,
RA   Nagata Y., Naito S., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M.,
RA   Meguro A., Negishi M., Ohta I., Ohta T., Okamoto M., Ono N., Saji S.,
RA   Sakaguchi M., Sakai K., Shibata M., Shimokawa T., Song J., Takazaki Y.,
RA   Terasawa K., Tsugane M., Tsuji K., Ueda S., Waki K., Yamagata H.,
RA   Yamamoto M., Yamamoto S., Yamane H., Yoshiki S., Yoshihara R., Yukawa K.,
RA   Zhong H., Yano M., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA   Moffat K., Hill J., Bera J., Fadrosh D., Jin S., Johri S., Kim M.,
RA   Overton L., Reardon M., Tsitrin T., Vuong H., Weaver B., Ciecko A.,
RA   Tallon L., Jackson J., Pai G., Aken S.V., Utterback T., Reidmuller S.,
RA   Feldblyum T., Hsiao J., Zismann V., Iobst S., de Vazeille A.R., Buell C.R.,
RA   Ying K., Li Y., Lu T., Huang Y., Zhao Q., Feng Q., Zhang L., Zhu J.,
RA   Weng Q., Mu J., Lu Y., Fan D., Liu Y., Guan J., Zhang Y., Yu S., Liu X.,
RA   Zhang Y., Hong G., Han B., Choisne N., Demange N., Orjeda G., Samain S.,
RA   Cattolico L., Pelletier E., Couloux A., Segurens B., Wincker P., D'Hont A.,
RA   Scarpelli C., Weissenbach J., Salanoubat M., Quetier F., Yu Y., Kim H.R.,
RA   Rambo T., Currie J., Collura K., Luo M., Yang T., Ammiraju J.S.S.,
RA   Engler F., Soderlund C., Wing R.A., Palmer L.E., de la Bastide M.,
RA   Spiegel L., Nascimento L., Zutavern T., O'Shaughnessy A., Dike S.,
RA   Dedhia N., Preston R., Balija V., McCombie W.R., Chow T., Chen H.,
RA   Chung M., Chen C., Shaw J., Wu H., Hsiao K., Chao Y., Chu M., Cheng C.,
RA   Hour A., Lee P., Lin S., Lin Y., Liou J., Liu S., Hsing Y., Raghuvanshi S.,
RA   Mohanty A., Bharti A.K., Gaur A., Gupta V., Kumar D., Ravi V., Vij S.,
RA   Kapur A., Khurana P., Khurana P., Khurana J.P., Tyagi A.K., Gaikwad K.,
RA   Singh A., Dalal V., Srivastava S., Dixit A., Pal A.K., Ghazi I.A.,
RA   Yadav M., Pandit A., Bhargava A., Sureshbabu K., Batra K., Sharma T.R.,
RA   Mohapatra T., Singh N.K., Messing J., Nelson A.B., Fuks G., Kavchok S.,
RA   Keizer G., Linton E., Llaca V., Song R., Tanyolac B., Young S., Ho-Il K.,
RA   Hahn J.H., Sangsakoo G., Vanavichit A., de Mattos Luiz.A.T., Zimmer P.D.,
RA   Malone G., Dellagostin O., de Oliveira A.C., Bevan M., Bancroft I.,
RA   Minx P., Cordum H., Wilson R., Cheng Z., Jin W., Jiang J., Leong S.A.,
RA   Iwama H., Gojobori T., Itoh T., Niimura Y., Fujii Y., Habara T., Sakai H.,
RA   Sato Y., Wilson G., Kumar K., McCouch S., Juretic N., Hoen D., Wright S.,
RA   Bruskiewich R., Bureau T., Miyao A., Hirochika H., Nishikawa T.,
RA   Kadowaki K., Sugiura M., Burr B., Sasaki T.;
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2] {ECO:0000313|Proteomes:UP000000763}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000000763};
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
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DR   EMBL; AP008211; BAH93069.1; -; Genomic_DNA.
DR   AlphaFoldDB; C7J306; -.
DR   Proteomes; UP000000763; Chromosome 5.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 1.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR015940; UBA.
DR   InterPro; IPR009060; UBA-like_sf.
DR   NCBIfam; TIGR00756; PPR; 13.
DR   PANTHER; PTHR45613:SF9; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR   PANTHER; PTHR45613; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 5.
DR   SUPFAM; SSF81901; HCP-like; 1.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   SUPFAM; SSF46934; UBA-like; 1.
DR   PROSITE; PS51375; PPR; 12.
DR   PROSITE; PS50030; UBA; 1.
PE   4: Predicted;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   REPEAT          173..203
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          210..244
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          279..313
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          314..348
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          439..473
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          474..508
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          509..543
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          579..613
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          614..648
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          649..683
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          684..718
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          719..753
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          892..920
FT                   /note="UBA"
FT                   /evidence="ECO:0000259|PROSITE:PS50030"
FT   REGION          1..36
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..28
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1070 AA;  119192 MW;  6B985E733A7DF13F CRC64;
     MSLRRLARSP SSRSLCAPRS FSFSTSASPP PRAPVPASPS YLAHHLLDEF SRPRATRDAA
     RLRRLAAELT APAAESVLLR LPSWRHALDF FRWAADQPGF RHSCYSLNAM ASLLPRHQRA
     HLDRLAADAI SARCLMTPGA LGFLLRCLGA AGLPDTAVRA FDAARASFGC TPNSYTYNCL
     LDALAKAGRA DDAQARLREM VARCGDGSVD KYTLTSLLRC YCNAGRPDDA NDVFQRMSEL
     GWVDEHVLTT LMVAFSKWGK VDGAVELLGS MEALGMRLSE KTLSVLVHGF TKQGRVDKAM
     DMFAKMVSYG FVVDLAMYSV LIEGLCQQKD IARAVKLFKE MKSSGVAPDV RLLKKVIEAF
     CREGDFAVIG PFINENAEYL KSGSVVPLYN VVLEELVHCG EVEAAYQLLR SMVCGGQAVN
     NDVAGGAHML HIREDAKPNS DSFNIVVCGL CKVKKLDMAL ALTKDMISLG CKGKILMFND
     LIHELCNMDR LEEGYGIFNQ MKDLGLTPSE FTYNSLFYGI CRRKDPKAAL DLLREMQTNG
     HPPWIKNCTE MVQQLCFSGR VTEAVQFLDG MLQIGFLPDI VTYSAAMNGM CNTGEVDDAL
     HLFRDISCKY YLPDVVAHNI LINGFRKSSK LDEAQKIMEE MLEKGLFPSV VTYNLMIDVC
     CKTGRIEKAI SYLDKMVYEE KQPTVITYTS LIDGFCSAGR PDEAIKLWCE MREKGCAPNN
     IAYTAFINGL RKCGRIETAL TYFEEMVTKG FELDTFSLLY FINFLISNGY PMKGCELLKE
     VLQKDTYGNN LKMVGLINEA VVELSKDGIT SSDILKFVDK GSVDCSLLLS TCPSASCNYF
     PAAYTGVNSV VPGLEARGNW RWALSVTEWV YKENIYEHGK SRYICDFLQE LSENDEKIKS
     LVSMGFPEDE AKTAITRCGN VYSANLSDYE DAEFSSFGGR KNTRFMDGSK KKSGMEVGHK
     GIKCHLVTAM KSQCLCQILW WIGVWTTISR FLFDIQPEFV GSFCAAARKM DYIHNLPIEN
     RSPVLPLPPN TISEAFLPTN MWWPSRSKKT VQLLAILRGK REAYRTLCSC
//
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