ID C7LPU5_DESBD Unreviewed; 317 AA.
AC C7LPU5;
DT 13-OCT-2009, integrated into UniProtKB/TrEMBL.
DT 13-OCT-2009, sequence version 1.
DT 27-MAR-2024, entry version 75.
DE RecName: Full=Radical SAM core domain-containing protein {ECO:0000259|PROSITE:PS51918};
GN OrderedLocusNames=Dbac_3355 {ECO:0000313|EMBL:ACU91427.1};
OS Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378 / X)
OS (Desulfovibrio baculatus).
OC Bacteria; Thermodesulfobacteriota; Desulfovibrionia; Desulfovibrionales;
OC Desulfomicrobiaceae; Desulfomicrobium.
OX NCBI_TaxID=525897 {ECO:0000313|EMBL:ACU91427.1, ECO:0000313|Proteomes:UP000002216};
RN [1] {ECO:0000313|EMBL:ACU91427.1, ECO:0000313|Proteomes:UP000002216}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 4028 / VKM B-1378 / X {ECO:0000313|Proteomes:UP000002216};
RX PubMed=21304634; DOI=10.4056/sigs.13134;
RA Copeland A., Spring S., Goker M., Schneider S., Lapidus A., Del Rio T.G.,
RA Tice H., Cheng J.F., Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S.,
RA Ivanova N., Mavrommatis K., Ovchinnikova G., Pati A., Chen A.,
RA Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.C., Meincke L.,
RA Sims D., Brettin T., Detter J.C., Han C., Chain P., Bristow J., Eisen J.A.,
RA Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Lucas S.;
RT "Complete genome sequence of Desulfomicrobium baculatum type strain (X).";
RL Stand. Genomic Sci. 1:29-37(2009).
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC Evidence={ECO:0000256|ARBA:ARBA00001966};
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DR EMBL; CP001629; ACU91427.1; -; Genomic_DNA.
DR RefSeq; WP_015775514.1; NC_013173.1.
DR AlphaFoldDB; C7LPU5; -.
DR STRING; 525897.Dbac_3355; -.
DR KEGG; dba:Dbac_3355; -.
DR eggNOG; COG1242; Bacteria.
DR HOGENOM; CLU_060920_0_0_7; -.
DR OrthoDB; 9801689at2; -.
DR Proteomes; UP000002216; Chromosome.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.80.30.20; tm_1862 like domain; 1.
DR InterPro; IPR039661; ELP3.
DR InterPro; IPR006638; Elp3/MiaA/NifB-like_rSAM.
DR InterPro; IPR032432; Radical_SAM_C.
DR InterPro; IPR007197; rSAM.
DR InterPro; IPR023404; rSAM_horseshoe.
DR InterPro; IPR005911; YhcC-like.
DR NCBIfam; TIGR01212; TIGR01212 family radical SAM protein; 1.
DR PANTHER; PTHR11135; HISTONE ACETYLTRANSFERASE-RELATED; 1.
DR PANTHER; PTHR11135:SF1; PROTEIN YHCC; 1.
DR Pfam; PF04055; Radical_SAM; 1.
DR Pfam; PF16199; Radical_SAM_C; 1.
DR SFLD; SFLDG01086; elongater_protein-like; 1.
DR SFLD; SFLDS00029; Radical_SAM; 1.
DR SFLD; SFLDG01091; uncharacterized_CHP01210-like; 1.
DR SMART; SM00729; Elp3; 1.
DR SUPFAM; SSF102114; Radical SAM enzymes; 1.
DR PROSITE; PS51918; RADICAL_SAM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002216}.
FT DOMAIN 16..260
FT /note="Radical SAM core"
FT /evidence="ECO:0000259|PROSITE:PS51918"
FT REGION 297..317
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 317 AA; 35727 MW; 1D1B73B8915FC8B6 CRC64;
MSHNRFYRLS LYFKQRFGQR VRKIPLDAGS SCPNRDGTLS RSGCAFCNQK GTGTGLAEAG
MSLRHQYFAY RELSRDRDTD TRFLGYLQSF SNTHGPAERL RALLQELAGL PDLVGLAIGT
RPDCLDEEKL DILRSAPFEE LWLDLGLQSA QDSTLHRINR GHDAACFATW AQKAAERGIK
VCAHVITGLP GENLADFEQT ILFVNSLPVS GIKIHNLYIC RDTPLESAWR AGSIALLSQE
ESQTWLVRGI ALLRQDIVIH RINSDPEQDE LLAPLWAMKK TAYLNAVKQH LHDTDTWQGK
ALGQKRPEWM NPQKEKT
//
