ID C7QYY3_JONDD Unreviewed; 748 AA.
AC C7QYY3;
DT 13-OCT-2009, integrated into UniProtKB/TrEMBL.
DT 13-OCT-2009, sequence version 1.
DT 24-JAN-2024, entry version 78.
DE SubName: Full=Glycogen debranching enzyme GlgX {ECO:0000313|EMBL:ACV09372.1};
GN OrderedLocusNames=Jden_1726 {ECO:0000313|EMBL:ACV09372.1};
OS Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / BCRC 15368 / CIP
OS 55.134 / JCM 11481 / NBRC 15587 / NCTC 10816 / Prevot 55134) (Listeria
OS denitrificans).
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Jonesiaceae;
OC Jonesia.
OX NCBI_TaxID=471856 {ECO:0000313|EMBL:ACV09372.1, ECO:0000313|Proteomes:UP000000628};
RN [1] {ECO:0000313|EMBL:ACV09372.1, ECO:0000313|Proteomes:UP000000628}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 14870 / DSM 20603 / BCRC 15368 / CIP 55.134 / JCM 11481 /
RC NBRC 15587 / NCTC 10816 / Prevot 55134
RC {ECO:0000313|Proteomes:UP000000628};
RX PubMed=21304666; DOI=10.4056/sigs.41646;
RA Pukall R., Gehrich-Schroter G., Lapidus A., Nolan M., Glavina Del Rio T.,
RA Lucas S., Chen F., Tice H., Pitluck S., Cheng J.F., Copeland A.,
RA Saunders E., Brettin T., Detter J.C., Bruce D., Goodwin L., Pati A.,
RA Ivanova N., Mavromatis K., Ovchinnikova G., Chen A., Palaniappan K.,
RA Land M., Hauser L., Chang Y.J., Jeffries C.D., Chain P., Goker M.,
RA Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA Klenk H.P., Han C.;
RT "Complete genome sequence of Jonesia denitrificans type strain (Prevot
RT 55134).";
RL Stand. Genomic Sci. 1:262-269(2009).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC {ECO:0000256|ARBA:ARBA00008061}.
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DR EMBL; CP001706; ACV09372.1; -; Genomic_DNA.
DR RefSeq; WP_015772000.1; NC_013174.1.
DR AlphaFoldDB; C7QYY3; -.
DR STRING; 471856.Jden_1726; -.
DR CAZy; CBM48; Carbohydrate-Binding Module Family 48.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR KEGG; jde:Jden_1726; -.
DR eggNOG; COG1523; Bacteria.
DR HOGENOM; CLU_011725_1_1_11; -.
DR OMA; WVTEMGV; -.
DR OrthoDB; 3236218at2; -.
DR Proteomes; UP000000628; Chromosome.
DR GO; GO:0004133; F:glycogen debranching enzyme activity; IEA:InterPro.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR CDD; cd11326; AmyAc_Glg_debranch; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR011837; Glycogen_debranch_GlgX.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR NCBIfam; TIGR02100; glgX_debranch; 1.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF3; ISOAMYLASE 3, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02922; CBM_48; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000628}.
FT DOMAIN 177..597
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 506..531
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 708..728
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 748 AA; 82139 MW; EFBE70A3D67CFB62 CRC64;
MSALPAGPLR VPLPPLGVRP REGGIDVAVH AAYATSVDVC LLFPGDKAEE GRWPYEEVRH
PLTASSYGVW WGFIPDVPVG TRYGFRVHGE WNPRLGLRHN PAKLLVDPYA RGLVGELSYD
ESTYGYMMKF ADGHRLDGNI HGLADPRDTA PLVPHGVVVD VPDAPVVARP HVPWAQTVVY
EAHVRGVTMR HPDLPPQLRG TYAGLGHEVM VSYLKDLGVT TVELLPIQAF VSEPHLIEKG
LTNYWGYNTL GFFAPHADYA TAAAKEAGPD GVIREVQEMV ASLHRAGLEV ILDVVYNHTC
EGGTGGQHLS WRGLDAPGYY LHDGSTPAQF ADVTGCGNTL DFTHPRVVQL ALDSMRYWVT
TFGVDGFRLD LAVTLGRDSA GFTPDHPFLV ALRTDPVLSQ VKIIAEPWDV GPGGWQTGNF
GAPFAEWNDR YRNCVRGFWL SDARSLSHGH HAGGVRELAT RLAGSADLFG HSDPPLMRGA
VASVNFVTAH DGFTVADLVA YDHKHNEKNG ENNRDGNNDN QSWNHGVEGP VDPDDAHVIA
SLRRRSMRNL LGTLLLSAGT PMLTAGDERG RTQHGNNNAY CQDNEVSWLE WEPNQWRDDL
HATVRHLLSM RAQLPALRID GFFSGGPLAH DDDHQPDLGW YSSDGTPLRH EQWHDPGTRV
VQMFRRGRIP GYGPDTDPHV LVIINGTLDS AAVTLPVHNT ERRWKLQWSS EWESPTSGDD
TREEAHGPGD NVVLEALSLA VYTADALG
//