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Database: UniProt
Entry: C7QYY3_JONDD
LinkDB: C7QYY3_JONDD
Original site: C7QYY3_JONDD 
ID   C7QYY3_JONDD            Unreviewed;       748 AA.
AC   C7QYY3;
DT   13-OCT-2009, integrated into UniProtKB/TrEMBL.
DT   13-OCT-2009, sequence version 1.
DT   24-JAN-2024, entry version 78.
DE   SubName: Full=Glycogen debranching enzyme GlgX {ECO:0000313|EMBL:ACV09372.1};
GN   OrderedLocusNames=Jden_1726 {ECO:0000313|EMBL:ACV09372.1};
OS   Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / BCRC 15368 / CIP
OS   55.134 / JCM 11481 / NBRC 15587 / NCTC 10816 / Prevot 55134) (Listeria
OS   denitrificans).
OC   Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Jonesiaceae;
OC   Jonesia.
OX   NCBI_TaxID=471856 {ECO:0000313|EMBL:ACV09372.1, ECO:0000313|Proteomes:UP000000628};
RN   [1] {ECO:0000313|EMBL:ACV09372.1, ECO:0000313|Proteomes:UP000000628}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 14870 / DSM 20603 / BCRC 15368 / CIP 55.134 / JCM 11481 /
RC   NBRC 15587 / NCTC 10816 / Prevot 55134
RC   {ECO:0000313|Proteomes:UP000000628};
RX   PubMed=21304666; DOI=10.4056/sigs.41646;
RA   Pukall R., Gehrich-Schroter G., Lapidus A., Nolan M., Glavina Del Rio T.,
RA   Lucas S., Chen F., Tice H., Pitluck S., Cheng J.F., Copeland A.,
RA   Saunders E., Brettin T., Detter J.C., Bruce D., Goodwin L., Pati A.,
RA   Ivanova N., Mavromatis K., Ovchinnikova G., Chen A., Palaniappan K.,
RA   Land M., Hauser L., Chang Y.J., Jeffries C.D., Chain P., Goker M.,
RA   Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA   Klenk H.P., Han C.;
RT   "Complete genome sequence of Jonesia denitrificans type strain (Prevot
RT   55134).";
RL   Stand. Genomic Sci. 1:262-269(2009).
CC   -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC       {ECO:0000256|ARBA:ARBA00008061}.
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DR   EMBL; CP001706; ACV09372.1; -; Genomic_DNA.
DR   RefSeq; WP_015772000.1; NC_013174.1.
DR   AlphaFoldDB; C7QYY3; -.
DR   STRING; 471856.Jden_1726; -.
DR   CAZy; CBM48; Carbohydrate-Binding Module Family 48.
DR   CAZy; GH13; Glycoside Hydrolase Family 13.
DR   KEGG; jde:Jden_1726; -.
DR   eggNOG; COG1523; Bacteria.
DR   HOGENOM; CLU_011725_1_1_11; -.
DR   OMA; WVTEMGV; -.
DR   OrthoDB; 3236218at2; -.
DR   Proteomes; UP000000628; Chromosome.
DR   GO; GO:0004133; F:glycogen debranching enzyme activity; IEA:InterPro.
DR   GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR   GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR   CDD; cd11326; AmyAc_Glg_debranch; 1.
DR   CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR   Gene3D; 3.20.20.80; Glycosidases; 1.
DR   Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR   InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR   InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR   InterPro; IPR004193; Glyco_hydro_13_N.
DR   InterPro; IPR013780; Glyco_hydro_b.
DR   InterPro; IPR011837; Glycogen_debranch_GlgX.
DR   InterPro; IPR017853; Glycoside_hydrolase_SF.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR014756; Ig_E-set.
DR   NCBIfam; TIGR02100; glgX_debranch; 1.
DR   PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR   PANTHER; PTHR43002:SF3; ISOAMYLASE 3, CHLOROPLASTIC; 1.
DR   Pfam; PF00128; Alpha-amylase; 1.
DR   Pfam; PF02922; CBM_48; 1.
DR   SMART; SM00642; Aamy; 1.
DR   SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR   SUPFAM; SSF81296; E set domains; 1.
DR   SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000000628}.
FT   DOMAIN          177..597
FT                   /note="Glycosyl hydrolase family 13 catalytic"
FT                   /evidence="ECO:0000259|SMART:SM00642"
FT   REGION          506..531
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          708..728
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   748 AA;  82139 MW;  EFBE70A3D67CFB62 CRC64;
     MSALPAGPLR VPLPPLGVRP REGGIDVAVH AAYATSVDVC LLFPGDKAEE GRWPYEEVRH
     PLTASSYGVW WGFIPDVPVG TRYGFRVHGE WNPRLGLRHN PAKLLVDPYA RGLVGELSYD
     ESTYGYMMKF ADGHRLDGNI HGLADPRDTA PLVPHGVVVD VPDAPVVARP HVPWAQTVVY
     EAHVRGVTMR HPDLPPQLRG TYAGLGHEVM VSYLKDLGVT TVELLPIQAF VSEPHLIEKG
     LTNYWGYNTL GFFAPHADYA TAAAKEAGPD GVIREVQEMV ASLHRAGLEV ILDVVYNHTC
     EGGTGGQHLS WRGLDAPGYY LHDGSTPAQF ADVTGCGNTL DFTHPRVVQL ALDSMRYWVT
     TFGVDGFRLD LAVTLGRDSA GFTPDHPFLV ALRTDPVLSQ VKIIAEPWDV GPGGWQTGNF
     GAPFAEWNDR YRNCVRGFWL SDARSLSHGH HAGGVRELAT RLAGSADLFG HSDPPLMRGA
     VASVNFVTAH DGFTVADLVA YDHKHNEKNG ENNRDGNNDN QSWNHGVEGP VDPDDAHVIA
     SLRRRSMRNL LGTLLLSAGT PMLTAGDERG RTQHGNNNAY CQDNEVSWLE WEPNQWRDDL
     HATVRHLLSM RAQLPALRID GFFSGGPLAH DDDHQPDLGW YSSDGTPLRH EQWHDPGTRV
     VQMFRRGRIP GYGPDTDPHV LVIINGTLDS AAVTLPVHNT ERRWKLQWSS EWESPTSGDD
     TREEAHGPGD NVVLEALSLA VYTADALG
//
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