ID C7R4I8_JONDD Unreviewed; 406 AA.
AC C7R4I8;
DT 13-OCT-2009, integrated into UniProtKB/TrEMBL.
DT 13-OCT-2009, sequence version 1.
DT 27-MAR-2024, entry version 70.
DE SubName: Full=3'-5' exonuclease {ECO:0000313|EMBL:ACV09045.1};
GN OrderedLocusNames=Jden_1392 {ECO:0000313|EMBL:ACV09045.1};
OS Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / BCRC 15368 / CIP
OS 55.134 / JCM 11481 / NBRC 15587 / NCTC 10816 / Prevot 55134) (Listeria
OS denitrificans).
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Jonesiaceae;
OC Jonesia.
OX NCBI_TaxID=471856 {ECO:0000313|EMBL:ACV09045.1, ECO:0000313|Proteomes:UP000000628};
RN [1] {ECO:0000313|EMBL:ACV09045.1, ECO:0000313|Proteomes:UP000000628}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 14870 / DSM 20603 / BCRC 15368 / CIP 55.134 / JCM 11481 /
RC NBRC 15587 / NCTC 10816 / Prevot 55134
RC {ECO:0000313|Proteomes:UP000000628};
RX PubMed=21304666; DOI=10.4056/sigs.41646;
RA Pukall R., Gehrich-Schroter G., Lapidus A., Nolan M., Glavina Del Rio T.,
RA Lucas S., Chen F., Tice H., Pitluck S., Cheng J.F., Copeland A.,
RA Saunders E., Brettin T., Detter J.C., Bruce D., Goodwin L., Pati A.,
RA Ivanova N., Mavromatis K., Ovchinnikova G., Chen A., Palaniappan K.,
RA Land M., Hauser L., Chang Y.J., Jeffries C.D., Chain P., Goker M.,
RA Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA Klenk H.P., Han C.;
RT "Complete genome sequence of Jonesia denitrificans type strain (Prevot
RT 55134).";
RL Stand. Genomic Sci. 1:262-269(2009).
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DR EMBL; CP001706; ACV09045.1; -; Genomic_DNA.
DR RefSeq; WP_015771673.1; NC_013174.1.
DR AlphaFoldDB; C7R4I8; -.
DR STRING; 471856.Jden_1392; -.
DR KEGG; jde:Jden_1392; -.
DR eggNOG; COG0349; Bacteria.
DR HOGENOM; CLU_042387_3_0_11; -.
DR OrthoDB; 144122at2; -.
DR Proteomes; UP000000628; Chromosome.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd06142; RNaseD_exo; 1.
DR Gene3D; 1.10.150.80; HRDC domain; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR041605; Exo_C.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR002121; HRDC_dom.
DR InterPro; IPR044876; HRDC_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47649; RIBONUCLEASE D; 1.
DR PANTHER; PTHR47649:SF1; RIBONUCLEASE D; 1.
DR Pfam; PF01612; DNA_pol_A_exo1; 1.
DR Pfam; PF18305; DNA_pol_A_exoN; 1.
DR Pfam; PF00570; HRDC; 1.
DR SMART; SM00474; 35EXOc; 1.
DR SMART; SM00341; HRDC; 1.
DR SUPFAM; SSF47819; HRDC-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50967; HRDC; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000313|EMBL:ACV09045.1};
KW Hydrolase {ECO:0000313|EMBL:ACV09045.1};
KW Nuclease {ECO:0000313|EMBL:ACV09045.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000628}.
FT DOMAIN 225..305
FT /note="HRDC"
FT /evidence="ECO:0000259|PROSITE:PS50967"
SQ SEQUENCE 406 AA; 45572 MW; 074AE3B2D9940D62 CRC64;
MSHQATHPTI PVLTHPQDGP ADLVNTTVSY QAALRRLDRG HGPFAVDAER ASGYRYGDRN
YLIQVRREGA GTFLIDPTAV DDFSELNAVM AADTWIFHAA IQDLGPLRDQ GLTPGTIFDT
EVAARLLGLD RVNLAAVTAH FLGVTLEKQH SHQDWSTRPL PSSWLTYAAL DVELLGDLAI
SETDALTETR KLRWAHEEFA YIQAQRAIHR PDPWRRTSGI QRVTDRRRLA VVQHLWNERE
KIARSKDLAP SRILSDRGII EAAITLPRTV GALLAIHEFG GAANRRRSHQ WQRAINHALT
LPSSELPPRR LPAPPKLPPH KIWEEKNPLA ATRLTAAREF LDELAATHHL PVENIIQPKV
VRQLLWDATT TPIDVPAYLT NNQVRPWQQE LVAQTLTMII DTITTP
//
