ID C8S3Z3_9RHOB Unreviewed; 906 AA.
AC C8S3Z3;
DT 03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT 03-NOV-2009, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EEW24255.1};
GN ORFNames=Rsw2DRAFT_2771 {ECO:0000313|EMBL:EEW24255.1};
OS Rhodobacter sp. SW2.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Rhodobacter.
OX NCBI_TaxID=371731 {ECO:0000313|EMBL:EEW24255.1, ECO:0000313|Proteomes:UP000010121};
RN [1] {ECO:0000313|EMBL:EEW24255.1, ECO:0000313|Proteomes:UP000010121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SW2 {ECO:0000313|EMBL:EEW24255.1,
RC ECO:0000313|Proteomes:UP000010121};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Larimer F., Land M.L., Hauser L., Emerson D.;
RT "The draft genome of Rhodobacter sp. SW2.";
RL Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEW24255.1}.
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DR EMBL; ACYY01000022; EEW24255.1; -; Genomic_DNA.
DR AlphaFoldDB; C8S3Z3; -.
DR STRING; 371731.Rsw2DRAFT_2771; -.
DR eggNOG; COG5001; Bacteria.
DR Proteomes; UP000010121; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 3.
DR Gene3D; 2.10.70.100; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 3.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR013655; PAS_fold_3.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 3.
DR PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF08447; PAS_3; 2.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 3.
DR SMART; SM00091; PAS; 3.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 3.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 3.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000010121};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..30
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 50..71
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 162..214
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 208..281
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 285..338
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 339..385
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 419..470
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 509..641
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 650..905
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 906 AA; 100844 MW; 98970582BA8BA7A1 CRC64;
MGKKYRSAVS MPLVVAGAYA AISTIYIFAS DRFLVLVADS YAHYELLQTY KGWAFVAITS
LFLWIILSYA WGRINQTLRE TLQLQRRFRL ALDAAGGGVW EERSTHGGGE SVHLSGRLAE
QIGLNSEMDF RHAELRKLVH PEDLPTFDAR VKSTDEPIEV VQDTTCRILA NDGEYRWVRI
VSEVIADHPD EPGQVVGVAL DVTEQKDIAQ QLQEIILGGE LGTWRFDLPA QVIHINERWA
EMLGYTKEEL DPVSVEQWRA FLHPDDLQRM ESAHEAQFSV GDYLFSNELR MRHRLGHWVW
VLSRGRVTRF SASGEPVIMS GVHGDISARK SLEKDLQNER DFLLRLTETS ISGILALDGD
GVVLFVNKEA EAILGLTTDQ MIGRTHDDPS WKITAPDGSP LGEHDFPFVR AVEQGIAFRD
IRLRIVRPDG RNRIISVNVA PILDTNSPIR VVCSVTDITA QAEFQHSLAR AAEAAQYAAL
HDQMTGLPNR ELFREYLEAA IRLANSNTIE LMLVFMDIDN FKQINDTYGH FNGDKLLLEL
SHRIASHQNT SDTMARIGGD EFTFLHQLQS GESAAEVLDP LVQELERPFL IDGGQVYLTV
SFGVSIFRRD ANDADEMLRN ADLAMYQAKG NGRNQHVVFS SSLRAQMSQQ AKVTQALQRA
LRDKTFSLVL QPKFSLNEPA RVSGAEALLR CNDPLLQSIG PGEFIPVAEQ AGLVRSIDLC
VVDMLGGIKA AWKQQGIDLR VSINLSSESL RWSGFGDALV RRFHENRIGP DDVLIELTES
ALMDMSPTSK ANMGSILAEG FDISADDFGT GYSSLSYLHL IQLRELKIDR SFIARLGAGV
GASDSIVRAI LAMARALGLR TVAEGVETEA QREWLQDQGC DEVQGFLFGA GMSVDAFTAN
FMMTKH
//
