ID   CAPSD_AMCV              Reviewed;         388 AA.
AC   P14836;
DT   01-APR-1990, integrated into UniProtKB/Swiss-Prot.
DT   05-OCT-2010, sequence version 2.
DT   27-MAR-2024, entry version 87.
DE   RecName: Full=Capsid protein;
DE   AltName: Full=Coat protein;
DE   AltName: Full=p41;
GN   ORFNames=ORF2;
OS   Artichoke mottled crinkle virus (AMCV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC   Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus;
OC   Tombusvirus cynarae.
OX   NCBI_TaxID=12142;
OH   NCBI_TaxID=59895; Cynara cardunculus var. scolymus (Globe artichoke) (Cynara scolymus).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RC   STRAIN=Bari-Dr. Gallitelli isolate;
RX   PubMed=2320427; DOI=10.1093/nar/18.5.1300;
RA   Grieco F., Gallitelli D.;
RT   "Nucleotide sequence of the 3'-terminal region of artichoke mottled crinkle
RT   tombusvirus RNA.";
RL   Nucleic Acids Res. 18:1300-1300(1990).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RC   STRAIN=Bari-Dr. Gallitelli isolate;
RX   PubMed=2491684; DOI=10.1007/bf00016023;
RA   Tavazza M., Lucioli A., Ancora G., Benvenuto E.;
RT   "cDNA cloning of artichoke mottled crinkle virus RNA and localization and
RT   sequencing of the coat protein gene.";
RL   Plant Mol. Biol. 13:685-692(1989).
RN   [3]
RP   SEQUENCE REVISION.
RA   Tavazza M.;
RL   Submitted (OCT-1991) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC       with a T=3 symmetry, about 32-35 nm in diameter, and consisting of 180
CC       capsid proteins.
CC   -!- SUBUNIT: Homomultimer. {ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC       {ECO:0000305}.
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DR   EMBL; X51456; CAA35821.1; -; Genomic_RNA.
DR   EMBL; X16060; CAA34196.1; -; Genomic_RNA.
DR   EMBL; X62493; CAA44357.1; -; Genomic_RNA.
DR   PIR; S08428; VCVGAC.
DR   PIR; S24926; S24926.
DR   RefSeq; NP_039810.1; NC_001339.1.
DR   SMR; P14836; -.
DR   GeneID; 1493940; -.
DR   KEGG; vg:1493940; -.
DR   OrthoDB; 10131at10239; -.
DR   Proteomes; UP000202336; Genome.
DR   GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF00729; Viral_coat; 1.
DR   PRINTS; PR00233; ICOSAHEDRAL.
DR   SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR   PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE   3: Inferred from homology;
KW   Capsid protein; RNA-binding; T=3 icosahedral capsid protein; Virion.
FT   CHAIN           1..388
FT                   /note="Capsid protein"
FT                   /id="PRO_0000222859"
FT   REGION          1..102
FT                   /note="R domain, interaction with RNA"
FT   REGION          56..61
FT                   /note="Involved in encapsidation"
FT                   /evidence="ECO:0000250"
FT   REGION          103..263
FT                   /note="S domain, virion shell"
FT   REGION          264..388
FT                   /note="P domain, projecting"
FT   CONFLICT        17
FT                   /note="T -> M (in Ref. 1; CAA35821)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        149
FT                   /note="A -> R (in Ref. 1; CAA35821)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        273
FT                   /note="L -> I (in Ref. 1; CAA35821)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        280
FT                   /note="L -> I (in Ref. 1; CAA35821)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        306..307
FT                   /note="FR -> IC (in Ref. 1; CAA35821)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        385
FT                   /note="V -> L (in Ref. 1; CAA35821)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   388 AA;  41164 MW;  D8636A99AEC60BC0 CRC64;
     MAMVKRNNNT GLIPVSTKQL MALGAAAGAS ALQGFVRNNG AAIVGKVVDV GQKVYKAVKK
     RGGKKQQQIK HVGGTGGAIM APVAVTRQLT GSKPKFTGKT SGSVTVTHRE YLSQVNMSTG
     FQVNGGIVGN LLQLNPLNGT LFSWLPAIAS NFDQYSFNSV LLHYVPLCAT TEVGRVAMYF
     DKDSEDPEPA DRVELANYSV LAETAPWAER ALWVPTDRIK RFCDDSSTLD HKLIDLGQLG
     VATYGGAGTN AVGDIFISYS VTLYFPQPTN TLLSTRRLDL AGTPVTASGP GYILLTRTPT
     VLTMTFRATG TFVISGAYRC LTSTVLGLTG GVNVNSITVV DNVGTSSSFF INCTVSNLPS
     VITFTTTGIT SATIQCNRAT RQNDVSLI
//