ID D0MJ30_RHOM4 Unreviewed; 295 AA.
AC D0MJ30;
DT 15-DEC-2009, integrated into UniProtKB/TrEMBL.
DT 15-DEC-2009, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE SubName: Full=DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ACY48488.1};
GN OrderedLocusNames=Rmar_1602 {ECO:0000313|EMBL:ACY48488.1};
OS Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus
OS obamensis).
OC Bacteria; Rhodothermota; Rhodothermia; Rhodothermales; Rhodothermaceae;
OC Rhodothermus.
OX NCBI_TaxID=518766 {ECO:0000313|EMBL:ACY48488.1, ECO:0000313|Proteomes:UP000002221};
RN [1] {ECO:0000313|EMBL:ACY48488.1, ECO:0000313|Proteomes:UP000002221}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43812 / DSM 4252 / R-10
RC {ECO:0000313|Proteomes:UP000002221};
RX PubMed=21304669; DOI=10.4056/sigs.46736;
RA Nolan M., Tindall B.J., Pomrenke H., Lapidus A., Copeland A.,
RA Glavina Del Rio T., Lucas S., Chen F., Tice H., Cheng J.F., Saunders E.,
RA Han C., Bruce D., Goodwin L., Chain P., Pitluck S., Ovchinikova G.,
RA Pati A., Ivanova N., Mavromatis K., Chen A., Palaniappan K., Land M.,
RA Hauser L., Chang Y.J., Jeffries C.D., Brettin T., Goker M., Bristow J.,
RA Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.,
RA Detter J.C.;
RT "Complete genome sequence of Rhodothermus marinus type strain (R-10).";
RL Stand. Genomic Sci. 1:283-291(2009).
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DR EMBL; CP001807; ACY48488.1; -; Genomic_DNA.
DR RefSeq; WP_012844099.1; NC_013501.1.
DR AlphaFoldDB; D0MJ30; -.
DR STRING; 518766.Rmar_1602; -.
DR KEGG; rmr:Rmar_1602; -.
DR eggNOG; COG5012; Bacteria.
DR HOGENOM; CLU_069772_0_0_10; -.
DR Proteomes; UP000002221; Chromosome.
DR GO; GO:0031419; F:cobalamin binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR CDD; cd02065; B12-binding_like; 1.
DR CDD; cd04762; HTH_MerR-trunc; 1.
DR Gene3D; 1.10.1660.10; -; 1.
DR Gene3D; 3.40.50.280; Cobalamin-binding domain; 1.
DR Gene3D; 1.10.1240.10; Methionine synthase domain; 1.
DR InterPro; IPR006158; Cobalamin-bd.
DR InterPro; IPR036724; Cobalamin-bd_sf.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR041657; HTH_17.
DR InterPro; IPR036594; Meth_synthase_dom.
DR InterPro; IPR010093; SinI_DNA-bd.
DR NCBIfam; TIGR01764; excise; 1.
DR Pfam; PF02310; B12-binding; 1.
DR Pfam; PF12728; HTH_17; 1.
DR SUPFAM; SSF52242; Cobalamin (vitamin B12)-binding domain; 1.
DR SUPFAM; SSF46955; Putative DNA-binding domain; 1.
DR PROSITE; PS51332; B12_BINDING; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002221}.
FT DOMAIN 166..295
FT /note="B12-binding"
FT /evidence="ECO:0000259|PROSITE:PS51332"
SQ SEQUENCE 295 AA; 33451 MW; 8AB80104C3C78906 CRC64;
MELSSVEAAE VLEVHVSSIK RWSRAGKLKA ERTPGGHRRF ALETLLAFAR QQQLAIALLK
FAPYEAQVWE GLQQLRQGII PEHLIALMYR WLREGRSGRL IRLVVFLYRR GVSVAALGDL
LLGPLVGRIG VDWEEGRVGV GEEHRMTHML IDALYALRRP EVEREAPFAL VACPESAHHE
LGALLVRLIL EELGWRVLYL GADVPAEEIG WQQQQWRAEL VALSFVPPLT RADVLRTLRV
LEQLYDETRP YTLVLGGRGA AEVGGLHGPF RSIHIFQKLS DFARWLRDYT THSHA
//
