ID D0MUR0_PHYIT Unreviewed; 496 AA.
AC D0MUR0;
DT 15-DEC-2009, integrated into UniProtKB/TrEMBL.
DT 15-DEC-2009, sequence version 1.
DT 24-JAN-2024, entry version 66.
DE SubName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative {ECO:0000313|EMBL:EEY61707.1};
GN ORFNames=PITG_02043 {ECO:0000313|EMBL:EEY61707.1};
OS Phytophthora infestans (strain T30-4) (Potato late blight agent).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=403677 {ECO:0000313|EMBL:EEY61707.1, ECO:0000313|Proteomes:UP000006643};
RN [1] {ECO:0000313|Proteomes:UP000006643}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=T30-4 {ECO:0000313|Proteomes:UP000006643};
RX PubMed=19741609; DOI=10.1038/nature08358;
RG The Broad Institute Genome Sequencing Platform;
RA Haas B.J., Kamoun S., Zody M.C., Jiang R.H., Handsaker R.E., Cano L.M.,
RA Grabherr M., Kodira C.D., Raffaele S., Torto-Alalibo T., Bozkurt T.O.,
RA Ah-Fong A.M., Alvarado L., Anderson V.L., Armstrong M.R., Avrova A.,
RA Baxter L., Beynon J., Boevink P.C., Bollmann S.R., Bos J.I., Bulone V.,
RA Cai G., Cakir C., Carrington J.C., Chawner M., Conti L., Costanzo S.,
RA Ewan R., Fahlgren N., Fischbach M.A., Fugelstad J., Gilroy E.M., Gnerre S.,
RA Green P.J., Grenville-Briggs L.J., Griffith J., Grunwald N.J., Horn K.,
RA Horner N.R., Hu C.H., Huitema E., Jeong D.H., Jones A.M., Jones J.D.,
RA Jones R.W., Karlsson E.K., Kunjeti S.G., Lamour K., Liu Z., Ma L.,
RA Maclean D., Chibucos M.C., McDonald H., McWalters J., Meijer H.J.,
RA Morgan W., Morris P.F., Munro C.A., O'Neill K., Ospina-Giraldo M.,
RA Pinzon A., Pritchard L., Ramsahoye B., Ren Q., Restrepo S., Roy S.,
RA Sadanandom A., Savidor A., Schornack S., Schwartz D.C., Schumann U.D.,
RA Schwessinger B., Seyer L., Sharpe T., Silvar C., Song J., Studholme D.J.,
RA Sykes S., Thines M., van de Vondervoort P.J., Phuntumart V., Wawra S.,
RA Weide R., Win J., Young C., Zhou S., Fry W., Meyers B.C., van West P.,
RA Ristaino J., Govers F., Birch P.R., Whisson S.C., Judelson H.S.,
RA Nusbaum C.;
RT "Genome sequence and analysis of the Irish potato famine pathogen
RT Phytophthora infestans.";
RL Nature 461:393-398(2009).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SNF5 family.
CC {ECO:0000256|ARBA:ARBA00010239}.
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DR EMBL; DS028119; EEY61707.1; -; Genomic_DNA.
DR RefSeq; XP_002908624.1; XM_002908578.1.
DR AlphaFoldDB; D0MUR0; -.
DR STRING; 403677.D0MUR0; -.
DR EnsemblProtists; PITG_02043T0; PITG_02043T0; PITG_02043.
DR GeneID; 9479435; -.
DR KEGG; pif:PITG_02043; -.
DR VEuPathDB; FungiDB:PITG_02043; -.
DR eggNOG; KOG1649; Eukaryota.
DR HOGENOM; CLU_034163_0_0_1; -.
DR InParanoid; D0MUR0; -.
DR OMA; PKFPTRD; -.
DR OrthoDB; 11049at2759; -.
DR Proteomes; UP000006643; Partially assembled WGS sequence.
DR GO; GO:0000228; C:nuclear chromosome; IEA:InterPro.
DR GO; GO:0070603; C:SWI/SNF superfamily-type complex; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006338; P:chromatin remodeling; IEA:InterPro.
DR CDD; cd00084; HMG-box_SF; 1.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR006939; SNF5.
DR PANTHER; PTHR10019; SNF5; 1.
DR PANTHER; PTHR10019:SF5; SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY B MEMBER 1; 1.
DR Pfam; PF00505; HMG_box; 1.
DR Pfam; PF04855; SNF5; 2.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00267}; Reference proteome {ECO:0000313|Proteomes:UP000006643};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 25..53
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
FT DOMAIN 349..417
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 349..417
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 330..350
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 457..496
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 333..349
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 469..489
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 496 AA; 56445 MW; 1031D76F9A80D20B CRC64;
MAGREFAHVQ PDNAEIERSV LSQEVEALRN RLGLRQVDVS KECGVNASML SQWMLGRYKG
NVGRVQINGL MESWLIRRRG GKPMDKGMMP SSPKLKRRLE EINDPLQAAR RKDNMILAQR
KLYSYPKFPT RDSLLIPIRL DIDIEGYRYI DSFSWNLYEK DFTYETFAAA LVRDLDLPNC
FYKRIAKSIQ EQVEKAQKSL PWNEAVTGES LHPIFINLRL NDTIYIDRFE WDLNNSNNSP
ERFAQIVCED LGLSGEFEAQ VALSIREQLR DYARLIREGL KDRVSRLPPV TAAFRDRLDA
ETWGPSVKYI LADDIPQLER EDFKRMRPLS RPTIHLTPPP APVAKPNRPP KPVNTFLMFC
RQNRKKIMAD HPATSAKDAS KILGDMWQKL SEKERASYIP MTEMENQRRM NEWRMKENAL
NGIHTTLTGG IATATASATT SQTNLAAIPG TPMLLAPRIT PSMASPMDDV DDADAEDDED
DDDDDEDTAS ATGIAV
//