ID D1PCH2_9BACT Unreviewed; 297 AA.
AC D1PCH2;
DT 09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT 09-FEB-2010, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFB35624.1};
GN ORFNames=PREVCOP_04906 {ECO:0000313|EMBL:EFB35624.1};
OS Segatella copri DSM 18205.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Segatella.
OX NCBI_TaxID=537011 {ECO:0000313|EMBL:EFB35624.1, ECO:0000313|Proteomes:UP000004477};
RN [1] {ECO:0000313|EMBL:EFB35624.1, ECO:0000313|Proteomes:UP000004477}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 18205 {ECO:0000313|EMBL:EFB35624.1,
RC ECO:0000313|Proteomes:UP000004477};
RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., Courtney L.,
RA Fronick C., Harrison M., Strong C., Farmer C., Delahaunty K., Markovic C.,
RA Hall O., Minx P., Tomlinson C., Mitreva M., Nelson J., Hou S., Wollam A.,
RA Pepin K.H., Johnson M., Bhonagiri V., Nash W.E., Warren W., Chinwalla A.,
RA Mardis E.R., Wilson R.K.;
RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EFB35624.1}.
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DR EMBL; ACBX02000014; EFB35624.1; -; Genomic_DNA.
DR RefSeq; WP_006847614.1; NZ_VZAC01000045.1.
DR AlphaFoldDB; D1PCH2; -.
DR STRING; 537011.PREVCOP_04906; -.
DR PaxDb; 537011-PREVCOP_04906; -.
DR GeneID; 69847710; -.
DR HOGENOM; CLU_039613_6_1_10; -.
DR OrthoDB; 9785745at2; -.
DR Proteomes; UP000004477; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30126:SF39; RUBISCO TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000004477};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
SQ SEQUENCE 297 AA; 33844 MW; DE48073DFF3FDE0E CRC64;
MIDTRLKVFR SVATLLSFTK AANELFISQP AISKHIQELE KEYGVQLFDR IGNRIQLTRA
GQLMLDHACK IIDAYQNLDF DMKKLTEKSG GELRIGASTT ISQYVLPELI AEFRKLYPDI
RLTLLSGNSH EIEDALAAGR IDLGMVEGIK RQPTFKYTPF MKDELVAFVH CSNPLAQQDE
ISLNLLRQTP IVLRELGSGT LDVIQKALQE NGIALSDLNI EMNLGTTEGI KHFVEHSLSM
GIISIRAIYR SIYEQVFKVL EIENLKMERE FLFVEKRGET AKLQQTFKRF ITKDYNV
//
