ID D1PQX7_9FIRM Unreviewed; 354 AA.
AC D1PQX7;
DT 09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT 09-FEB-2010, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFB74823.1};
GN ORFNames=SUBVAR_06803 {ECO:0000313|EMBL:EFB74823.1};
OS Subdoligranulum variabile DSM 15176.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC Subdoligranulum.
OX NCBI_TaxID=411471 {ECO:0000313|EMBL:EFB74823.1, ECO:0000313|Proteomes:UP000003438};
RN [1] {ECO:0000313|EMBL:EFB74823.1, ECO:0000313|Proteomes:UP000003438}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15176 {ECO:0000313|EMBL:EFB74823.1,
RC ECO:0000313|Proteomes:UP000003438};
RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., Courtney L.,
RA Fronick C., Harrison M., Strong C., Farmer C., Delahaunty K., Markovic C.,
RA Hall O., Minx P., Tomlinson C., Mitreva M., Nelson J., Hou S., Wollam A.,
RA Pepin K.H., Johnson M., Bhonagiri V., Nash W.E., Warren W., Chinwalla A.,
RA Mardis E.R., Wilson R.K.;
RL Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EFB74823.1}.
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DR EMBL; ACBY02000054; EFB74823.1; -; Genomic_DNA.
DR RefSeq; WP_007048155.1; NZ_GG704770.1.
DR AlphaFoldDB; D1PQX7; -.
DR STRING; 411471.SUBVAR_06803; -.
DR eggNOG; COG1609; Bacteria.
DR HOGENOM; CLU_037628_15_0_9; -.
DR OrthoDB; 9813468at2; -.
DR Proteomes; UP000003438; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd01541; PBP1_AraR; 1.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR033532; AraR_ligand_bind_dom.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30146:SF147; ARABINOSE METABOLISM TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00392; GntR; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR PRINTS; PR00035; HTHGNTR.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000003438};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..69
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 354 AA; 39622 MW; 08F74D0289A3B9C2 CRC64;
MAAKYQTLAE TLRQELLHQG QHGYKLPTEQ ELSERYGLSR QTVRHALQML EQEGLIQRRQ
GSGSFSTGRG GSTSRQVAVV ATFLDDYIFP TILHDAQSVF AREGYSTLVY ATENEVSTER
DILQQLLSQP VAGILVEGAK TALPNPNLQL YRQLRDSGVP LLFLHGACAE LKGVPCISDD
NYSGGYLLAR HLLDKGHRSI AGIFKSDDLQ GPQRYHGCVS AIRDAGLPLR DRSFLWYDTQ
DRLEMVNLND ISLLRRFLDV RLDKSTAVIC YNDEIAFLLI RELLARGVRV PQDVAVVSFD
NSYYSQISQV PITSLRHPVP RMGQVAAEQL LRMLQGESGH SRALPWELVE RASG
//
