GenomeNet

Database: UniProt
Entry: D2EGV4_PEDAC
LinkDB: D2EGV4_PEDAC
Original site: D2EGV4_PEDAC 
ID   D2EGV4_PEDAC            Unreviewed;       400 AA.
AC   D2EGV4;
DT   09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT   09-FEB-2010, sequence version 1.
DT   27-MAR-2024, entry version 51.
DE   RecName: Full=beta-lactamase {ECO:0000256|ARBA:ARBA00012865};
DE            EC=3.5.2.6 {ECO:0000256|ARBA:ARBA00012865};
GN   ORFNames=HMPREF9024_00016 {ECO:0000313|EMBL:EFA27199.1};
OS   Pediococcus acidilactici 7_4.
OC   Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC   Pediococcus; Pediococcus acidilactici group.
OX   NCBI_TaxID=563194 {ECO:0000313|EMBL:EFA27199.1, ECO:0000313|Proteomes:UP000005738};
RN   [1] {ECO:0000313|EMBL:EFA27199.1, ECO:0000313|Proteomes:UP000005738}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=7_4 {ECO:0000313|EMBL:EFA27199.1,
RC   ECO:0000313|Proteomes:UP000005738};
RG   The Broad Institute Genome Sequencing Platform;
RA   Ward D., Earl A., Feldgarden M., Young S.K., Zeng Q., Koehrsen M.,
RA   Alvarado L., Berlin A., Bochicchio J., Borenstein D., Chapman S.B.,
RA   Chen Z., Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A.,
RA   Gujja S., Heilman E., Heiman D., Hepburn T., Howarth C., Jen D., Larson L.,
RA   Lewis B., Mehta T., Park D., Pearson M., Roberts A., Saif S., Shea T.,
RA   Shenoy N., Sisk P., Stolte C., Sykes S., Thomson T., Walk T., White J.,
RA   Yandava C., Allen-Vercoe E., Strauss J., Ambrose C., McDonald J., Haas B.,
RA   Nusbaum C., Birren B.;
RT   "The Genome Sequence of Pediococcus acidilactici strain 7_4.";
RL   Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a beta-lactam + H2O = a substituted beta-amino acid;
CC         Xref=Rhea:RHEA:20401, ChEBI:CHEBI:15377, ChEBI:CHEBI:35627,
CC         ChEBI:CHEBI:140347; EC=3.5.2.6;
CC         Evidence={ECO:0000256|ARBA:ARBA00001526};
CC   -!- SIMILARITY: Belongs to the class-A beta-lactamase family.
CC       {ECO:0000256|ARBA:ARBA00009009}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; GG730083; EFA27199.1; -; Genomic_DNA.
DR   RefSeq; WP_002829257.1; NZ_GG730083.1.
DR   AlphaFoldDB; D2EGV4; -.
DR   HOGENOM; CLU_031960_9_4_9; -.
DR   Proteomes; UP000005738; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0008800; F:beta-lactamase activity; IEA:InterPro.
DR   GO; GO:0030655; P:beta-lactam antibiotic catabolic process; IEA:InterPro.
DR   GO; GO:0046677; P:response to antibiotic; IEA:UniProtKB-KW.
DR   Gene3D; 4.10.1060.50; -; 1.
DR   Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR   InterPro; IPR012338; Beta-lactam/transpept-like.
DR   InterPro; IPR045155; Beta-lactam_cat.
DR   InterPro; IPR000871; Beta-lactam_class-A.
DR   InterPro; IPR038587; Ribosomal_eL40_sf.
DR   InterPro; IPR026870; Zinc_ribbon_dom.
DR   PANTHER; PTHR35333; BETA-LACTAMASE; 1.
DR   PANTHER; PTHR35333:SF3; BETA-LACTAMASE2 DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF13354; Beta-lactamase2; 1.
DR   Pfam; PF13240; zinc_ribbon_2; 1.
DR   SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
PE   3: Inferred from homology;
KW   Antibiotic resistance {ECO:0000256|ARBA:ARBA00023251};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        73..93
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          2..24
FT                   /note="Zinc-ribbon"
FT                   /evidence="ECO:0000259|Pfam:PF13240"
FT   DOMAIN          161..374
FT                   /note="Beta-lactamase class A catalytic"
FT                   /evidence="ECO:0000259|Pfam:PF13354"
FT   REGION          26..61
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          113..136
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        26..44
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   400 AA;  43622 MW;  FD40C2A0A9C280C6 CRC64;
     MFCQNCGTKN KPGAKFCRKC GTALRQPATQ PTPVTSQTAP TIPQPAPKQS APTEPSVTRE
     EHQAAVKRKK HTGWLWITAG IILAIGFVGF FIYKNNPTIL SGVTHSDQAK VASSKSTSSV
     SSTPQKKTSS ASTKKHLAFP KSTVEGTIRD AFGDISGDTA VYVSPVDSDT EVDFNDQPQR
     AASDIKLFVM IAAYQQVKDG ELSLSDDYTL TDSDKVDGTG KLREMADGTK ISIKDLIGYM
     MEDSDNTAAN IMIRKLGGMA AVNHQIDKMG ATDTKLERML MDTDALEDGK DNYTSAKDLG
     TALKKIYNHQ MVSRKYDEEM LTILKQNGNH TKLPHDLPTE ATVYNKTGEF DDYGVENDAA
     IFGNQKGAFV IVVMSQDGQR DEQINAMNSF GSVMYKGLLE
//
DBGET integrated database retrieval system