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Database: UniProt
Entry: D2I0I1_AILME
LinkDB: D2I0I1_AILME
Original site: D2I0I1_AILME 
ID   D2I0I1_AILME            Unreviewed;       612 AA.
AC   D2I0I1;
DT   09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT   09-FEB-2010, sequence version 1.
DT   24-JAN-2024, entry version 44.
DE   RecName: Full=Small ribosomal subunit protein mS39 {ECO:0000256|ARBA:ARBA00035134};
DE   Flags: Fragment;
GN   ORFNames=PANDA_018670 {ECO:0000313|EMBL:EFB15291.1};
OS   Ailuropoda melanoleuca (Giant panda).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda.
OX   NCBI_TaxID=9646 {ECO:0000313|EMBL:EFB15291.1};
RN   [1] {ECO:0000313|EMBL:EFB15291.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=20010809; DOI=10.1038/nature08696;
RA   Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B.,
RA   Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J.,
RA   Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A.,
RA   Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B.,
RA   Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W.,
RA   Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M.,
RA   Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G.,
RA   Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C.,
RA   Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D.,
RA   Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W.,
RA   Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q.,
RA   Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X.,
RA   Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y.,
RA   Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L.,
RA   Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J.,
RA   Wang J.;
RT   "The sequence and de novo assembly of the giant panda genome.";
RL   Nature 463:311-317(2010).
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
CC   -!- SIMILARITY: Belongs to the mitochondrion-specific ribosomal protein
CC       mS39 family. {ECO:0000256|ARBA:ARBA00008551}.
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DR   EMBL; GL193893; EFB15291.1; -; Genomic_DNA.
DR   AlphaFoldDB; D2I0I1; -.
DR   InParanoid; D2I0I1; -.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0043024; F:ribosomal small subunit binding; IEA:InterPro.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0032543; P:mitochondrial translation; IEA:InterPro.
DR   GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR   InterPro; IPR033443; PPR_long.
DR   InterPro; IPR037387; PTCD3.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   PANTHER; PTHR16276; PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3; 1.
DR   PANTHER; PTHR16276:SF1; PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3, MITOCHONDRIAL; 1.
DR   Pfam; PF17177; PPR_long; 1.
PE   3: Inferred from homology;
KW   Mitochondrion {ECO:0000256|ARBA:ARBA00023128};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW   rRNA-binding {ECO:0000256|ARBA:ARBA00022730};
KW   Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT   DOMAIN          198..315
FT                   /note="Pentacotripeptide-repeat region of PRORP"
FT                   /evidence="ECO:0000259|Pfam:PF17177"
FT   REGION          592..612
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:EFB15291.1"
FT   NON_TER         612
FT                   /evidence="ECO:0000313|EMBL:EFB15291.1"
SQ   SEQUENCE   612 AA;  69964 MW;  CABC907984DDF319 CRC64;
     SVSSQDATAA PYAFQDDPFL IPTSSVESRS FLLAKKSGEN AAKFIINSHP KYFQKDIAEP
     HIPCLMPEYF EPQIEDISEA ALRERIELKK VKASVDMFDQ LLQAGTAISL ETSNSLLDLL
     CYYGDKEPST DYHFQQSEKS EELEEATEEN NKKSEKTDHQ FGVTWRTKNN AERIFALMPE
     KNSHSYCTMI RGMVKHRAPA RALNLYTELL NNRLHADVYT FNALIEARAL SVSEKLEDKW
     NNILELLKQM AAQKVKPNLQ TFNTILKWLR RFHVFGKLPA LQTFREMKAI GIEPSLATYH
     YIIQLFYHQE NPSKGSSLII YDIMNELTGQ KFSPKDPDDD MFFQSAMKAC SFLRDLELAY
     QVHGLLNTGD NWKFIGPDHR RNFYYSKFFS LVCLMEQIDV TLKWYKDLIP SVFFPRSQTL
     IDLLQALDVA NRLEVIPQIW KDSKEYGHTF HNVLKEEILM LMARDKHSPE LQVAFADCAA
     DIKSTYESQD GRQTAPEWPA NSLNYVAVLF LRAGRTQEAW EMLGLFKKHN KIPGNELLNE
     FMDSAKASNS PAQAIEIVKL ASAFSLPICE GLTQRVMADF AINQEQKEAL ENLTSLTSDS
     DSDSDSDINE GK
//
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