ID D2QIU4_SPILD Unreviewed; 1182 AA.
AC D2QIU4;
DT 02-MAR-2010, integrated into UniProtKB/TrEMBL.
DT 02-MAR-2010, sequence version 1.
DT 27-MAR-2024, entry version 76.
DE SubName: Full=PKD domain containing protein {ECO:0000313|EMBL:ADB40020.1};
GN OrderedLocusNames=Slin_4030 {ECO:0000313|EMBL:ADB40020.1};
OS Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896 / Claus 1).
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.
OX NCBI_TaxID=504472 {ECO:0000313|EMBL:ADB40020.1, ECO:0000313|Proteomes:UP000002028};
RN [1] {ECO:0000313|Proteomes:UP000002028}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33905 / DSM 74 / LMG 10896
RC {ECO:0000313|Proteomes:UP000002028};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA Mikhailova N., Ovchinnikova G., Saunders E., Brettin T., Detter J.C.,
RA Han C., Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Tindal B., Schutze A., Schneider S.,
RA Goker M., Klenk H.-P., Eisen J.A.;
RT "The complete chromosome of Spirosoma linguale DSM 74.";
RL Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADB40020.1, ECO:0000313|Proteomes:UP000002028}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33905 / DSM 74 / LMG 10896
RC {ECO:0000313|Proteomes:UP000002028};
RX PubMed=21304700;
RA Lail K., Sikorski J., Saunders E., Lapidus A., Glavina Del Rio T.,
RA Copeland A., Tice H., Cheng J.-F., Lucas S., Nolan M., Bruce D.,
RA Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Ovchinnikova G.,
RA Pati A., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.-J.,
RA Jeffries C.D., Chain P., Brettin T., Detter J.C., Schuetze A., Rohde M.,
RA Tindall B.J., Goeker M., Bristow J., Eisen J.A., Markowitz V.,
RA Hugenholtz P., Kyrpides N.C., Klenk H.-P., Chen F.;
RT "Complete genome sequence of Spirosoma linguale type strain (1).";
RL Stand. Genomic Sci. 2:176-185(2010).
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DR EMBL; CP001769; ADB40020.1; -; Genomic_DNA.
DR AlphaFoldDB; D2QIU4; -.
DR STRING; 504472.Slin_4030; -.
DR CAZy; CBM6; Carbohydrate-Binding Module Family 6.
DR KEGG; sli:Slin_4030; -.
DR eggNOG; COG2133; Bacteria.
DR eggNOG; COG3291; Bacteria.
DR eggNOG; COG3828; Bacteria.
DR eggNOG; COG4654; Bacteria.
DR HOGENOM; CLU_002470_1_0_10; -.
DR Proteomes; UP000002028; Chromosome.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd04084; CBM6_xylanase-like; 1.
DR CDD; cd00146; PKD; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR Gene3D; 1.10.760.10; Cytochrome c-like domain; 1.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 2.120.10.30; TolB, C-terminal domain; 1.
DR InterPro; IPR011042; 6-blade_b-propeller_TolB-like.
DR InterPro; IPR006584; Cellulose-bd_IV.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR005084; CMB_fam6.
DR InterPro; IPR009056; Cyt_c-like_dom.
DR InterPro; IPR036909; Cyt_c-like_dom_sf.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR012938; Glc/Sorbosone_DH.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR022409; PKD/Chitinase_dom.
DR InterPro; IPR000601; PKD_dom.
DR InterPro; IPR035986; PKD_dom_sf.
DR InterPro; IPR011041; Quinoprot_gluc/sorb_DH.
DR InterPro; IPR029010; ThuA-like.
DR PANTHER; PTHR40469:SF2; GALACTOSE-BINDING DOMAIN-LIKE SUPERFAMILY PROTEIN; 1.
DR PANTHER; PTHR40469; SECRETED GLYCOSYL HYDROLASE; 1.
DR Pfam; PF03422; CBM_6; 1.
DR Pfam; PF00034; Cytochrom_C; 1.
DR Pfam; PF07995; GSDH; 1.
DR Pfam; PF18911; PKD_4; 1.
DR Pfam; PF06283; ThuA; 1.
DR SMART; SM00606; CBD_IV; 1.
DR SMART; SM00089; PKD; 1.
DR SUPFAM; SSF52317; Class I glutamine amidotransferase-like; 1.
DR SUPFAM; SSF46626; Cytochrome c; 1.
DR SUPFAM; SSF49785; Galactose-binding domain-like; 1.
DR SUPFAM; SSF49299; PKD domain; 1.
DR SUPFAM; SSF50952; Soluble quinoprotein glucose dehydrogenase; 1.
DR PROSITE; PS51007; CYTC; 1.
DR PROSITE; PS50093; PKD; 1.
PE 4: Predicted;
KW Heme {ECO:0000256|ARBA:ARBA00022617, ECO:0000256|PROSITE-ProRule:PRU00433};
KW Iron {ECO:0000256|ARBA:ARBA00023004, ECO:0000256|PROSITE-ProRule:PRU00433};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00433}.
FT DOMAIN 775..846
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
FT DOMAIN 918..1004
FT /note="Cytochrome c"
FT /evidence="ECO:0000259|PROSITE:PS51007"
FT REGION 38..65
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1182 AA; 130305 MW; 35BFBA8662C12C07 CRC64;
MTWLPTSLRQ SVRIFGFAGL SLALYACLNN QKTISQNTKS PVSSVAPANG AASNEAQPKP
APAGPKRVLV FSKTKGWKHT SIPFGIAALQ KMGRENAFRV DTTKNADYFN DDSLRHYTAV
VFLSTTGNVL NQKQQAAFER YIQAGGGYMG IHAAADTEYD WPWYNKLAGG YFASHPSNSN
VRKATVDVTD KNHASTAHLP DHWERTDEWY NYRSLYADLT VVANLDESTY DGGINGSNHP
IAWYHEFDGG RAYYTGGGHE DSSFSEPLFV QHLLGALNWV MGSGKPLDYS KAYATVTPEE
NRFVKTVLVN DLNEPMELAV APDGRVFFTE RSGNLSVYNN QTNKSQLVHR FDVPTKAGHG
VQGITLDPNF AANHFLYVYY SPQFTQEPFY NLSRFVVKDD NTLDLASEKI LLTVPSIDQP
GSHHGGSLAF DKEGNLYLST GDHTNPFPSN GYAPIDARPD HLAADARGTA ANTNDLRGKI
LRIRPLPDGT YTIPEGNLFP KGMAQTKPEI YTMGLRNPYR IALNPKSSVL YWGEIGPDAG
KDSSTLGPRG YDEFNQAKKA GNFGWPLFIG NSQPYGDLDF ATNAVGPRFD PKAPVNNSSK
NTGLKNLPPT NPAMIWYPYA ASKEFPELGQ GGRSAMAGEF YTYDQNSPSK NKFPDYYNSA
LFIFDWMRNW VMAVRVDKDD NYIRSEPFMA AQGDFRRPID LAFSKDGIMY MLEYGSVYGA
DNDDARLVKI EYNTGNRPPI ARASVIDSVA AAQHNARSYL TSDGRNAPVL REAIGLAPLR
VKFAGRGTDL DDDDEVTYQW LFDGKTVAST KPMATYTYTQ PGVYNAILKV TDKMGQVGMD
TISVKVGNAK PEVAIVTPDN KSFFWENKPF TYAVKVADQE DKKIDPKRIK VLYEYSAQPN
GAPMTAPQQG HQEVAQLSGG SLGKTLVAGS DCKACHTIDK PSVGPTFLAV ADRYKGQAGS
VERLARKIIE GGGGNWSKDH LMSAHPQIPV QDAQEMVKYI FSLTDARKQK AVPLQGTLAL
NEHKPEDTRG QYTLLATYTD KGTKSVGPLT SSEVVTLRNA TVKTLNADAY VGFPRFGSRL
SAGSNKAYVL LKDIDMTTIK SLTYDYSSLN KDGEIEVRLD SYAGPVVSRA SYKATGDWKT
TNQVTGTLNK PFTGRHDVYV VVVKWSKPNN DIIQLNSIRF NQ
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