ID D2SDQ1_GEOOG Unreviewed; 543 AA.
AC D2SDQ1;
DT 02-MAR-2010, integrated into UniProtKB/TrEMBL.
DT 02-MAR-2010, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE SubName: Full=Alpha amylase catalytic region {ECO:0000313|EMBL:ADB74504.1};
GN OrderedLocusNames=Gobs_1794 {ECO:0000313|EMBL:ADB74504.1};
OS Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / KCC
OS A-0152 / KCTC 9177 / NBRC 13315 / NRRL B-3577 / G-20).
OC Bacteria; Actinomycetota; Actinomycetes; Geodermatophilales;
OC Geodermatophilaceae; Geodermatophilus.
OX NCBI_TaxID=526225 {ECO:0000313|EMBL:ADB74504.1, ECO:0000313|Proteomes:UP000001382};
RN [1] {ECO:0000313|EMBL:ADB74504.1, ECO:0000313|Proteomes:UP000001382}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25078 / DSM 43160 / JCM 3152 / KCC A-0152 / KCTC 9177 /
RC NBRC 13315 / NRRL B-3577 / G-20 {ECO:0000313|Proteomes:UP000001382};
RX PubMed=21304698;
RA Ivanova N., Sikorski J., Jando M., Munk C., Lapidus A., Glavina Del Rio T.,
RA Copeland A., Tice H., Cheng J.-F., Lucas S., Chen F., Nolan M., Bruce D.,
RA Goodwin L., Pitluck S., Mavromatis K., Mikhailova N., Pati A., Chen A.,
RA Palaniappan K., Land M., Hauser L., Chang Y.-J., Jeffries C.D., Meincke L.,
RA Brettin T., Detter J.C., Detter J.C., Rohde M., Goeker M., Bristow J.,
RA Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.-P.;
RT "Complete genome sequence of Geodermatophilus obscurus type strain (G-
RT 20).";
RL Stand. Genomic Sci. 2:158-167(2010).
RN [2] {ECO:0000313|Proteomes:UP000001382}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25078 / DSM 43160 / JCM 3152 / KCC A-0152 / KCTC 9177 /
RC NBRC 13315 / NRRL B-3577 / G-20 {ECO:0000313|Proteomes:UP000001382};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA Munk A.C., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L.,
RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M.,
RA Schneider S., Klenk H.-P., Eisen J.A.;
RT "The complete genome of Geodermatophilus obscurus DSM 43160.";
RL Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP001867; ADB74504.1; -; Genomic_DNA.
DR RefSeq; WP_012947944.1; NC_013757.1.
DR AlphaFoldDB; D2SDQ1; -.
DR STRING; 526225.Gobs_1794; -.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR KEGG; gob:Gobs_1794; -.
DR eggNOG; COG0366; Bacteria.
DR HOGENOM; CLU_006462_2_3_11; -.
DR OrthoDB; 9043248at2; -.
DR Proteomes; UP000001382; Chromosome.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd11332; AmyAc_OligoGlu_TS; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR InterPro; IPR022567; DUF3459.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR045857; O16G_dom_2.
DR PANTHER; PTHR10357; ALPHA-AMYLASE FAMILY MEMBER; 1.
DR PANTHER; PTHR10357:SF179; NEUTRAL AND BASIC AMINO ACID TRANSPORT PROTEIN RBAT; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF11941; DUF3459; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001382}.
FT DOMAIN 33..410
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
SQ SEQUENCE 543 AA; 59153 MW; 2B1C1388E2F7EB75 CRC64;
MARRLSLART QPRRRVAPAA APAPWWRDAV VYQVYLRSFA DSDGDGIGDL RGLRQRLPYL
SWLGVGAVWI NPHYPSGGAD GGYDVVDYRA VDPDYGDVSD LEALVDDARR LGLKVVLDVV
PNHTSDQHPW FQAALADPDS PEAARYHFAP ASEEPPNNWR SLFGGPAWSR TPDGRWYLHL
FAPEQPDLNW RDPVVAEDFE RTLRFWLDRG VSGFRVDVAY GLYKDAGLRD NPGSYSPTLF
GHGPEQAMTW NQPEVHDVWR RWRSICDEYP DTMLVGEVCL ADLEQVALYS RPDELHQSLS
FRLLKSPWAV APFAEAISSA LDAYGRVGAP VSWVLGNHDK ERQVTRFGGG EVGTARARAA
ALLTLALPGS AYLYAGDELG LPQAHVPDEA KKDPIFHRSG GARAGRDGCR VPMPWNPTEG
VGFSPEGAAE PWLPIPADWG RYAVSVQTGQ GGSTLTLHRR ALALRKAHPA FASGSATVTT
RGDVLTIRSV GGGEAVRCVV NMGSETVLAG CPGQVLLAST AAVRRSGGTV ALPPDSAVWV
LED
//
