GenomeNet

Database: UniProt
Entry: D2YIG4_VIBMI
LinkDB: D2YIG4_VIBMI
Original site: D2YIG4_VIBMI 
ID   D2YIG4_VIBMI            Unreviewed;       244 AA.
AC   D2YIG4;
DT   02-MAR-2010, integrated into UniProtKB/TrEMBL.
DT   02-MAR-2010, sequence version 1.
DT   24-JAN-2024, entry version 31.
DE   RecName: Full=tRNA/rRNA methyltransferase SpoU type domain-containing protein {ECO:0000259|Pfam:PF00588};
GN   ORFNames=VMB_33110 {ECO:0000313|EMBL:EEW05485.1};
OS   Vibrio mimicus VM603.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Vibrio.
OX   NCBI_TaxID=671074 {ECO:0000313|EMBL:EEW05485.1, ECO:0000313|Proteomes:UP000004827};
RN   [1] {ECO:0000313|EMBL:EEW05485.1, ECO:0000313|Proteomes:UP000004827}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=VM603 {ECO:0000313|EMBL:EEW05485.1,
RC   ECO:0000313|Proteomes:UP000004827};
RX   PubMed=19860885; DOI=10.1186/1471-2148-9-258;
RA   Thompson C.C., Vicente A.C., Souza R.C., Vasconcelos A.T., Vesth T.,
RA   Alves N.Jr., Ussery D.W., Iida T., Thompson F.L.;
RT   "Genomic taxonomy of Vibrios.";
RL   BMC Evol. Biol. 9:258-258(2009).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EEW05485.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; ACYU01000179; EEW05485.1; -; Genomic_DNA.
DR   RefSeq; WP_000624121.1; NZ_ACYU01000179.1.
DR   AlphaFoldDB; D2YIG4; -.
DR   Proteomes; UP000004827; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR   GO; GO:0001510; P:RNA methylation; IEA:GOC.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd18109; SpoU-like_RNA-MTase; 1.
DR   Gene3D; 3.30.1330.30; -; 1.
DR   Gene3D; 3.40.1280.10; -; 1.
DR   InterPro; IPR029028; Alpha/beta_knot_MTases.
DR   InterPro; IPR029064; Ribosomal_eL30-like_sf.
DR   InterPro; IPR001537; SpoU_MeTrfase.
DR   InterPro; IPR029026; tRNA_m1G_MTases_N.
DR   PANTHER; PTHR43191; RRNA METHYLTRANSFERASE 3; 1.
DR   PANTHER; PTHR43191:SF2; RRNA METHYLTRANSFERASE 3, MITOCHONDRIAL; 1.
DR   Pfam; PF00588; SpoU_methylase; 1.
DR   SUPFAM; SSF75217; alpha/beta knot; 1.
DR   SUPFAM; SSF55315; L30e-like; 1.
PE   4: Predicted;
KW   Methyltransferase {ECO:0000256|ARBA:ARBA00022603};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          102..236
FT                   /note="tRNA/rRNA methyltransferase SpoU type"
FT                   /evidence="ECO:0000259|Pfam:PF00588"
SQ   SEQUENCE   244 AA;  26121 MW;  F62ECF509E817670 CRC64;
     MISKTQLKLI RALGQKKQRK AHGLFLVQGE KNVLELASST LKVQNIFATA EFLAEHANVL
     AGNECTEAAL DDLTKVSTLV SNNAAIAVVE IPRIEVPKAQ GLMIGLDGVS DPGNLGTIIR
     LADWYGIQHI IASQDCADPY NPKTISATMG SFGRVQVSQV DLPDYLAKAN LPVYGAFLEG
     VSVHQTAFKA EGILLMGSES HGIREQAAQY VTDKITIPAF GGAESLNVAM ATGIILDNIR
     RQHS
//
DBGET integrated database retrieval system