ID D3RTQ0_ALLVD Unreviewed; 694 AA.
AC D3RTQ0;
DT 20-APR-2010, integrated into UniProtKB/TrEMBL.
DT 20-APR-2010, sequence version 1.
DT 27-MAR-2024, entry version 81.
DE SubName: Full=Glycogen debranching enzyme GlgX {ECO:0000313|EMBL:ADC62559.1};
GN OrderedLocusNames=Alvin_1627 {ECO:0000313|EMBL:ADC62559.1};
OS Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB
OS 10441 / D) (Chromatium vinosum).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae;
OC Allochromatium.
OX NCBI_TaxID=572477 {ECO:0000313|EMBL:ADC62559.1, ECO:0000313|Proteomes:UP000001441};
RN [1] {ECO:0000313|EMBL:ADC62559.1, ECO:0000313|Proteomes:UP000001441}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D
RC {ECO:0000313|Proteomes:UP000001441};
RX PubMed=22675582; DOI=10.4056/sigs.2335270;
RA Weissgerber T., Zigann R., Bruce D., Chang Y.J., Detter J.C., Han C.,
RA Hauser L., Jeffries C.D., Land M., Munk A.C., Tapia R., Dahl C.;
RT "Complete genome sequence of Allochromatium vinosum DSM 180(T).";
RL Stand. Genomic Sci. 5:311-330(2011).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast
CC {ECO:0000256|ARBA:ARBA00004229}.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC {ECO:0000256|ARBA:ARBA00008061}.
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DR EMBL; CP001896; ADC62559.1; -; Genomic_DNA.
DR RefSeq; WP_012970833.1; NC_013851.1.
DR AlphaFoldDB; D3RTQ0; -.
DR STRING; 572477.Alvin_1627; -.
DR CAZy; CBM48; Carbohydrate-Binding Module Family 48.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR KEGG; alv:Alvin_1627; -.
DR eggNOG; COG1523; Bacteria.
DR HOGENOM; CLU_011725_1_1_6; -.
DR OrthoDB; 3236218at2; -.
DR Proteomes; UP000001441; Chromosome.
DR GO; GO:0004133; F:glycogen debranching enzyme activity; IEA:InterPro.
DR GO; GO:0019156; F:isoamylase activity; IEA:UniProt.
DR GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR CDD; cd11326; AmyAc_Glg_debranch; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR011837; Glycogen_debranch_GlgX.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR048650; ISOA1-3-like_C.
DR NCBIfam; TIGR02100; glgX_debranch; 1.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF1; ISOAMYLASE 1, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02922; CBM_48; 1.
DR Pfam; PF21156; ISOA1-3_C; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 3: Inferred from homology;
KW Chloroplast {ECO:0000256|ARBA:ARBA00022528};
KW Plastid {ECO:0000256|ARBA:ARBA00022640};
KW Reference proteome {ECO:0000313|Proteomes:UP000001441};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT DOMAIN 160..569
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
SQ SEQUENCE 694 AA; 78657 MW; 2F1CDCA05C4804F2 CRC64;
MRPLRYRVRP GSWETAGATV MEGGVNFCVL SRYAERMQLL LFECEESPDP YEVIQLDPRV
NRTFFFWHVF VENLPEGTFY NWRAEGQADL RETGSRLDVE KALLDPWATT ISDRLWDRAA
ASRPGDNVET AIRGQVLRDD YDWEDDKPLF IPLSQAVIYE MHVGGFTRHP SSGVAHPGTF
SGIVEKIPYL KELGITHVEL MPVMAFDAQD VPPKTASLGL ENYWGYSTHS FFAPHPGFAV
SAGQARDEFR NMIKAFHKAG IGVILDVVFN HTAEGGAGGP VISFKAFGNE IFYHLDFEDR
SQYRDYTGCG NTMNCNHPLV TRFLIDALLY WVRRMHVDGF RFDLASALAR GEDGNPQYHA
PVLWAIELAP SLNRAHIIAE AWDAAGLYQV GDFPGYRWTE WNGRYRDVIR GFVRGDPGLV
SEVATRLAGS SDMYEGRHRL PMNSINFVTC HDGFTLCDLV SYDHKHNEAN GEDNRDGHDH
NLSWNCGYEG PTDDREIQRL RRRQARNFIS ILMLSQGVPM LLSGDEVFRT KRGNNNTYCQ
NNELSWSDWG LVESNRDVLE FVRAMIALRR RHPALMRDRF LTGQPEYGQT LPDITWHGTR
LDKPDWDDPT SRVLAFTLAG KVEDEPPLHV MFNMDGVEHT FELPVIAGRH WCLAVDTCPE
GGLVVPPEAQ HPLQNPDRFA VGAHGVVVLE SRSV
//
