ID D3UBA8_9POAL Unreviewed; 320 AA.
AC D3UBA8;
DT 20-APR-2010, integrated into UniProtKB/TrEMBL.
DT 20-APR-2010, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=Phytochrome C {ECO:0000313|EMBL:ADC95674.1};
DE Flags: Fragment;
GN Name=PHYC {ECO:0000313|EMBL:ADC95674.1};
OS Puya compacta.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Bromeliaceae; Puyoideae;
OC Puya.
OX NCBI_TaxID=693554 {ECO:0000313|EMBL:ADC95674.1};
RN [1] {ECO:0000313|EMBL:ADC95674.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=R247 {ECO:0000313|EMBL:ADC95674.1};
RX AGRICOLA=IND44323710; DOI=10.3732/ajb.0900107;
RA Jabaily R.S., Sytsma K.J.;
RT "Phylogenetics of Puya (Bromeliaceae): Placement, major lineages, and
RT evolution of Chilean species.";
RL Am. J. Bot. 97:337-356(2010).
CC -!- FUNCTION: Regulatory photoreceptor which exists in two forms that are
CC reversibly interconvertible by light: the Pr form that absorbs
CC maximally in the red region of the spectrum and the Pfr form that
CC absorbs maximally in the far-red region. Photoconversion of Pr to Pfr
CC induces an array of morphogenic responses, whereas reconversion of Pfr
CC to Pr cancels the induction of those responses. Pfr controls the
CC expression of a number of nuclear genes including those encoding the
CC small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B
CC binding protein, protochlorophyllide reductase, rRNA, etc. It also
CC controls the expression of its own gene(s) in a negative feedback
CC fashion. {ECO:0000256|ARBA:ARBA00002479}.
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; FJ968275; ADC95674.1; -; Genomic_DNA.
DR AlphaFoldDB; D3UBA8; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:UniProt.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 4..175
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ADC95674.1"
FT NON_TER 320
FT /evidence="ECO:0000313|EMBL:ADC95674.1"
SQ SEQUENCE 320 AA; 35783 MW; 17F018B1A2A4B3B6 CRC64;
PSGNIPLLCD VLVREVSELT GYDRVMAYMF HEDEHGEVIA ECRRSDLEPY LGLHYPATDI
PQASRFLFMK NKVRMICDCT APPVKVIQDK RLAEPLILSG STLRAPHGCH AQYMVNMGSI
ASLVMSVTIN EDEEETGSDQ QQHMGRKLWG LVVCHHTSPR FVPFPLRYAC EFLLQVFSIQ
LNKEVELEAQ AKEKHILQTQ TLLCDMLLRD APIGIFTQSP NVMDLVKCHG AALYYKNQFW
LLGTTPSESQ IKDIVAWLLE YHDGSTGLST DSLAEAGYPG ASALGDAVCG MAAIKITSKD
FMFWFRSHTA KEIKWGGAKN
//
